Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1001 to 1025 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1963979
1963991
ACGCCC
12
+
2
ACGCCC
C9E72_RS09805
1963792
1964931
+
Genic
187
NZ_CP028592.1
1967512
1967526
AATACG
14
+
2
TACGAA
wzc
1965383
1967545
+
Genic
2129
NZ_CP028592.1
1967912
1967924
ACGATG
12
+
2
CGATGA
wcaA
1967638
1968477
+
Genic
274
NZ_CP028592.1
1969071
1969084
ACGGCT
13
+
2
CTACGG
wcaC
1968965
1970182
+
Genic
106
NZ_CP028592.1
1971371
1971383
AAGAAT
12
+
2
TAAGAA
wcaD
1970157
1971374
+
Genic
1214
NZ_CP028592.1
1975725
1975737
AGCCCC
12
-
2
GCTGGG
wcaI
1975292
1976515
+
Genic
433
NZ_CP028592.1
1975747
1975759
AAAGGC
12
+
2
AAAGGC
wcaI
1975292
1976515
+
Genic
455
NZ_CP028592.1
1976854
1976866
ACCAGC
12
-
2
TGCTGG
cpsB
1976518
1977954
+
Genic
336
NZ_CP028592.1
1977130
1977142
AACAGG
12
-
2
TGTTCC
cpsB
1976518
1977954
+
Genic
612
NZ_CP028592.1
1978086
1978098
AAAAAC
12
+
2
ACAAAA
cpsG
1978147
1979517
+
Intergenic
-49
NZ_CP028592.1
1979479
1979492
AACGCG
13
+
2
CGCGAA
cpsG
1978147
1979517
+
Genic
1332
NZ_CP028592.1
1979590
1979602
AGCG
12
+
3
GCGA
wcaJ
1979572
1980966
+
Genic
18
NZ_CP028592.1
1982416
1982428
AAAATG
12
+
2
AAAATG
wzxC
1980968
1982446
+
Genic
1448
NZ_CP028592.1
1982928
1982940
ATCGCC
12
+
2
ATCGCC
wcaK
1982626
1983906
+
Genic
302
NZ_CP028592.1
1986599
1986611
AGCCCC
12
-
2
GCTGGG
wcaM
1985134
1986528
+
Intergenic
1465
NZ_CP028592.1
1988243
1988255
AAACCT
12
-
2
TTTAGG
galF
1987924
1988817
+
Genic
319
NZ_CP028592.1
1989803
1989815
AAATGT
12
-
2
ACATTT
C9E72_RS09915
1989136
1989918
+
Genic
667
NZ_CP028592.1
1990031
1990043
AATTAT
12
+
2
ATTATA
wzy
1989915
1991099
+
Genic
116
NZ_CP028592.1
1993029
1993041
AATATC
12
-
2
ATTGAT
wzx
1991801
1993192
+
Genic
1228
NZ_CP028592.1
1993188
1993200
AAAATG
12
+
2
ATGAAA
C9E72_RS09935
1993195
1994289
+
Genic
5
NZ_CP028592.1
1993232
1993245
AAAAAG
13
+
2
AAAAGA
C9E72_RS09935
1993195
1994289
+
Genic
37
NZ_CP028592.1
1998347
1998359
AAAT
12
+
3
AAAT
C9E72_RS09960
1998128
1999576
+
Genic
219
NZ_CP028592.1
1998830
1998842
AGGATG
12
-
2
CCTCAT
C9E72_RS09960
1998128
1999576
+
Genic
702
NZ_CP028592.1
2002417
2002429
AATAGC
12
-
2
TTGCTA
C9E72_RS09975
2002213
2002878
+
Genic
204
NZ_CP028592.1
2007166
2007179
AGGATC
13
-
2
GATCCT
C9E72_RS10000
2007120
2007731
-
Genic
552