Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1026 to 1050 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2007463
2007475
ACCAGT
12
+
2
CCAGTA
C9E72_RS10000
2007120
2007731
-
Genic
256
NZ_CP028592.1
2009387
2009399
AAAAGT
12
+
2
AAAGTA
hisH
2009220
2009810
-
Genic
411
NZ_CP028592.1
2009467
2009480
AGCGGC
13
+
2
GCGGCA
hisH
2009220
2009810
-
Genic
330
NZ_CP028592.1
2011345
2011363
AGCC
18
+
4
GCCA
hisC
2010877
2011947
-
Genic
584
NZ_CP028592.1
2013593
2013605
AAGTCG
12
-
2
ACTTCG
hisG
2013254
2014153
-
Genic
548
NZ_CP028592.1
2017376
2017388
AAGGTG
12
+
2
TGAAGG
plaP
2016841
2018199
+
Genic
535
NZ_CP028592.1
2020323
2020335
AACTGG
12
-
2
TCCAGT
sbcB
2019720
2021144
-
Genic
809
NZ_CP028592.1
2021437
2021449
AACTGG
12
-
2
TCCAGT
C9E72_RS10080
2021326
2022504
+
Genic
111
NZ_CP028592.1
2024795
2024807
ACCATG
12
-
2
GGTCAT
C9E72_RS10110
2024503
2025450
-
Genic
643
NZ_CP028592.1
2029225
2029239
AGATGG
14
-
2
TCCATC
C9E72_RS10170
2029141
2029392
-
Genic
153
NZ_CP028592.1
2029578
2029590
AAACGC
12
-
2
GTTTGC
C9E72_RS10175
2029451
2029723
-
Genic
133
NZ_CP028592.1
2031982
2031994
AAAATG
12
-
2
TTTCAT
C9E72_RS10190
2031335
2032030
-
Genic
36
NZ_CP028592.1
2033390
2033402
AAATAC
12
+
2
AAATAC
C9E72_RS10205
2032939
2033760
+
Genic
451
NZ_CP028592.1
2033906
2033918
AAACAG
12
+
2
AGAAAC
C9E72_RS10210
2033757
2035133
+
Genic
149
NZ_CP028592.1
2036180
2036193
AAAACC
13
+
2
CCAAAA
C9E72_RS10225
2036070
2036285
+
Genic
110
NZ_CP028592.1
2036806
2036819
ACCGAT
13
-
2
GGTATC
C9E72_RS10235
2036752
2036967
+
Genic
54
NZ_CP028592.1
2037619
2037631
AAATC
12
+
2
ATCAA
C9E72_RS10250
2037614
2038141
+
Genic
5
NZ_CP028592.1
2040329
2040341
AAACAG
12
+
2
CAGAAA
C9E72_RS10275
2040156
2040761
+
Genic
173
NZ_CP028592.1
2041594
2041606
ATC
12
-
4
ATG
C9E72_RS10285
2041420
2041908
+
Genic
174
NZ_CP028592.1
2043105
2043117
ACAGTG
12
-
2
TGTCAC
stxA2
2042558
2043517
+
Genic
547
NZ_CP028592.1
2045604
2045616
AAAAAC
12
+
2
ACAAAA
C9E72_RS10320
2044662
2046599
+
Genic
942
NZ_CP028592.1
2048745
2048758
AATCTG
13
+
2
TGAATC
C9E72_RS10350
2048654
2049151
+
Genic
91
NZ_CP028592.1
2049773
2049785
AAAAAT
12
-
2
TTTATT
C9E72_RS10360
2049868
2050095
-
Intergenic
310
NZ_CP028592.1
2050963
2050975
ACCTCC
12
-
2
GGTGGA
C9E72_RS10375
2050794
2051357
+
Genic
169
NZ_CP028592.1
2051331
2051344
AATGAT
13
+
2
ATAATG
C9E72_RS10375
2050794
2051357
+
Genic
537