Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 976 to 1000 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1908468
1908480
ACAGCG
12
-
2
GCTGTC
C9E72_RS09545
1908451
1908993
+
Genic
17
NZ_CP028592.1
1912689
1912701
ACGATG
12
-
2
GTCATC
C9E72_RS09560
1912262
1913296
+
Genic
427
NZ_CP028592.1
1914351
1914383
ACCACG
32
-
5
TCGTGG
C9E72_RS09570
1913934
1914779
-
Genic
396
NZ_CP028592.1
1923535
1923547
AGAGC
12
+
2
GAGCA
C9E72_RS09630
1922780
1924057
-
Genic
510
NZ_CP028592.1
1925155
1925168
CCCGG
13
-
2
GGGCC
fbaB
1924314
1925366
+
Genic
841
NZ_CP028592.1
1926986
1927000
AAAGC
14
-
2
TGCTT
gatY
1925665
1926519
+
Intergenic
1321
NZ_CP028592.1
1927060
1927073
AACCGG
13
-
2
GTTCCG
gatY
1925665
1926519
+
Intergenic
1395
NZ_CP028592.1
1930583
1930596
ACTGGC
13
+
2
ACTGGC
gatD
1929994
1931034
+
Genic
589
NZ_CP028592.1
1932296
1932309
AATACC
13
+
2
TACCAA
yegS
1931995
1932894
-
Genic
585
NZ_CP028592.1
1932937
1932949
AAAAG
12
+
2
AGAAA
yegS
1931995
1932894
-
Intergenic
-43
NZ_CP028592.1
1933441
1933454
AAGCCG
13
+
2
CCGAAG
C9E72_RS09680
1933300
1933617
+
Genic
141
NZ_CP028592.1
1934819
1934831
AGATCG
12
-
2
GATCTC
C9E72_RS09690
1933947
1935308
-
Genic
477
NZ_CP028592.1
1936819
1936832
AGCCCC
13
+
2
CCAGCC
baeS
1936698
1938101
-
Genic
1269
NZ_CP028592.1
1942059
1942072
ACATCG
13
+
2
CGACAT
mdtC
1939514
1942591
-
Genic
519
NZ_CP028592.1
1945790
1945802
AAGTGG
12
-
2
CCACTT
mdtA
1945714
1946961
-
Genic
1159
NZ_CP028592.1
1946883
1946895
AACCAG
12
+
2
CCAGAA
mdtA
1945714
1946961
-
Genic
66
NZ_CP028592.1
1946920
1946934
AATCGT
14
-
2
ACGATT
mdtA
1945714
1946961
-
Genic
27
NZ_CP028592.1
1947963
1947976
AGGGGG
13
+
2
AGGGGG
ibsA
1947897
1947956
+
Intergenic
66
NZ_CP028592.1
1951104
1951117
AAGCAG
13
+
2
GCAGAA
yegI
1949591
1951531
+
Genic
1513
NZ_CP028592.1
1953323
1953336
CCGCG
13
-
2
GGCGC
alkA
1953030
1953878
+
Genic
293
NZ_CP028592.1
1954778
1954791
CCCCGG
13
+
2
CCCGGC
alkA
1953030
1953878
+
Intergenic
1748
NZ_CP028592.1
1957224
1957236
AAACCT
12
+
2
CTAAAC
C9E72_RS09775
1957615
1958256
+
Intergenic
-379
NZ_CP028592.1
1958607
1958620
AGCGCC
13
-
2
GCTGGC
C9E72_RS09780
1958348
1958929
+
Genic
259
NZ_CP028592.1
1959661
1959673
AGGGGC
12
+
2
CAGGGG
asmA
1958951
1960804
+
Genic
710
NZ_CP028592.1
1961738
1961752
AGCGGC
14
+
2
CAGCGG
C9E72_RS09800
1961550
1963133
-
Genic
1381