Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1326 to 1350 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2658661
2658673
AAAAG
12
+
2
AGAAA
C9E72_RS13860
2658562
2658876
+
Genic
99
NZ_CP028592.1
2660047
2660059
ACCTCC
12
-
2
GGTGGA
C9E72_RS13875
2659878
2660441
+
Genic
169
NZ_CP028592.1
2660415
2660428
AATGAT
13
+
2
ATAATG
C9E72_RS13875
2659878
2660441
+
Genic
537
NZ_CP028592.1
2660690
2660702
AAGGAT
12
-
2
TTATCC
C9E72_RS13880
2660438
2662099
+
Genic
252
NZ_CP028592.1
2661569
2661581
AGCCC
12
-
2
GGCTG
C9E72_RS13880
2660438
2662099
+
Genic
1131
NZ_CP028592.1
2663630
2663643
ATCCGC
13
-
2
CGGATG
C9E72_RS13885
2662163
2664100
+
Genic
1467
NZ_CP028592.1
2663838
2663851
ACCAGC
13
-
2
GCTGGT
C9E72_RS13885
2662163
2664100
+
Genic
1675
NZ_CP028592.1
2664048
2664061
ACCGCC
13
-
2
GGCGGT
C9E72_RS13885
2662163
2664100
+
Genic
1885
NZ_CP028592.1
2666127
2666139
ACCGGT
12
+
2
TACCGG
C9E72_RS13895
2664312
2666813
+
Genic
1815
NZ_CP028592.1
2666289
2666301
ACCGGT
12
+
2
TACCGG
C9E72_RS13895
2664312
2666813
+
Genic
1977
NZ_CP028592.1
2668692
2668704
AATGAC
12
+
2
ATGACA
C9E72_RS13920
2668422
2669138
+
Genic
270
NZ_CP028592.1
2669748
2669760
AGGATG
12
+
2
GAGGAT
C9E72_RS13930
2669614
2669823
+
Genic
134
NZ_CP028592.1
2671665
2671678
AGCCCC
13
-
2
GCTGGG
C9E72_RS13935
2669876
2673118
+
Genic
1789
NZ_CP028592.1
2672022
2672034
ACTGGC
12
+
2
ACTGGC
C9E72_RS13935
2669876
2673118
+
Genic
2146
NZ_CP028592.1
2672192
2672204
AATGAG
12
+
2
AGAATG
C9E72_RS13935
2669876
2673118
+
Genic
2316
NZ_CP028592.1
2672801
2672813
AACAGC
12
+
2
ACAGCA
C9E72_RS13935
2669876
2673118
+
Genic
2925
NZ_CP028592.1
2674055
2674067
AAGCAG
12
-
2
TTCTGC
C9E72_RS13950
2674011
2675224
-
Genic
1157
NZ_CP028592.1
2675545
2675557
ACACGG
12
+
2
ACGGAC
C9E72_RS13955
2675390
2678650
+
Genic
155
NZ_CP028592.1
2675601
2675614
AGCAGG
13
+
2
GGAGCA
C9E72_RS13955
2675390
2678650
+
Genic
211
NZ_CP028592.1
2677713
2677725
AATATC
12
+
2
TATCAA
C9E72_RS13955
2675390
2678650
+
Genic
2323
NZ_CP028592.1
2678735
2678748
ACCGTG
13
-
2
CGGTCA
C9E72_RS13960
2678653
2678868
+
Genic
82
NZ_CP028592.1
2680122
2680136
ACGAGG
14
-
2
CGTCCT
C9E72_RS13970
2679600
2680913
+
Genic
522
NZ_CP028592.1
2681544
2681557
AACCTG
13
-
2
TTCAGG
C9E72_RS13980
2681300
2681875
+
Genic
244
NZ_CP028592.1
2682275
2682287
AACTCT
12
-
2
AGAGTT
C9E72_RS13985
2682253
2682600
+
Genic
22
NZ_CP028592.1
2682662
2682674
AAAATC
12
+
2
CAAAAT
C9E72_RS13990
2682585
2683235
+
Genic
77