Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1351 to 1375 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2684568
2684580
AAGACG
12
-
2
GTCTTC
C9E72_RS14000
2683818
2685356
-
Genic
776
NZ_CP028592.1
2684849
2684861
ACCTGC
12
-
2
AGGTGC
C9E72_RS14000
2683818
2685356
-
Genic
495
NZ_CP028592.1
2693445
2693458
AGCGGG
13
+
2
AGCGGG
C9E72_RS14080
2693076
2694119
+
Genic
369
NZ_CP028592.1
2693551
2693566
ACAGAT
15
+
2
AGATAC
C9E72_RS14080
2693076
2694119
+
Genic
475
NZ_CP028592.1
2695019
2695031
AAACGG
12
+
2
AACGGA
C9E72_RS14090
2694607
2695323
+
Genic
412
NZ_CP028592.1
2699244
2699256
ACCATG
12
-
2
TGGTCA
C9E72_RS14135
2698376
2699425
+
Genic
868
NZ_CP028592.1
2701503
2701515
ATATCC
12
-
2
TATGGA
C9E72_RS14155
2700919
2701632
+
Genic
584
NZ_CP028592.1
2702530
2702542
ACAGCC
12
-
2
TGGCTG
C9E72_RS14170
2702087
2702515
+
Intergenic
443
NZ_CP028592.1
2702944
2702956
AACCGG
12
-
2
TTCCGG
C9E72_RS14180
2702993
2704843
+
Intergenic
-37
NZ_CP028592.1
2704754
2704768
ACGCTG
14
+
2
CGCTGA
C9E72_RS14180
2702993
2704843
+
Genic
1761
NZ_CP028592.1
2705557
2705570
AACAGT
13
-
2
TTACTG
C9E72_RS14190
2705503
2705847
+
Genic
54
NZ_CP028592.1
2707545
2707558
AGCTCC
13
-
2
GAGCTG
C9E72_RS14210
2707640
2707825
+
Intergenic
-82
NZ_CP028592.1
2708450
2708462
AAAAG
12
+
2
AGAAA
C9E72_RS14215
2708351
2708665
+
Genic
99
NZ_CP028592.1
2711109
2711121
ATCCCC
12
-
2
ATGGGG
C9E72_RS14235
2709878
2711803
+
Genic
1231
NZ_CP028592.1
2714831
2714844
ACCGGC
13
+
2
GGCACC
C9E72_RS14250
2713585
2714904
+
Genic
1246
NZ_CP028592.1
2718289
2718301
AGGGGC
12
+
2
GGGCAG
C9E72_RS14285
2718080
2718832
+
Genic
209
NZ_CP028592.1
2719040
2719053
AATGGG
13
-
2
CATTCC
C9E72_RS14290
2718846
2719268
+
Genic
194
NZ_CP028592.1
2720717
2720729
ATGCCC
12
-
2
GCATGG
C9E72_RS14295
2719295
2719708
+
Intergenic
1422
NZ_CP028592.1
2723828
2723840
ACAGGG
12
-
2
TGTCCC
C9E72_RS14315
2723336
2724079
+
Genic
492
NZ_CP028592.1
2724258
2724270
AGCCGG
12
+
2
GCCGGA
C9E72_RS14320
2724025
2724657
+
Genic
233
NZ_CP028592.1
2725059
2725071
ACACGG
12
+
2
ACGGAC
C9E72_RS14325
2724904
2728383
+
Genic
155
NZ_CP028592.1
2725115
2725128
AGCAGG
13
+
2
GGAGCA
C9E72_RS14325
2724904
2728383
+
Genic
211
NZ_CP028592.1
2728263
2728275
ACACTG
12
+
2
CTGACA
C9E72_RS14325
2724904
2728383
+
Genic
3359
NZ_CP028592.1
2728366
2728379
ACTGAT
13
-
2
GTATCA
C9E72_RS14325
2724904
2728383
+
Genic
3462
NZ_CP028592.1
2729637
2729651
ACGAGG
14
-
2
CGTCCT
C9E72_RS14335
2729115
2730428
+
Genic
522