Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1401 to 1425 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2789488
2789502
AACCAT
14
+
2
CATAAC
C9E72_RS14625
2789290
2789412
-
Intergenic
-76
NZ_CP028592.1
2792656
2792668
AAAGGT
12
+
2
TAAAGG
C9E72_RS14635
2791338
2793710
+
Genic
1318
NZ_CP028592.1
2792750
2792762
ACTATG
12
+
2
TATGAC
C9E72_RS14635
2791338
2793710
+
Genic
1412
NZ_CP028592.1
2793127
2793139
AAAACC
12
+
2
CAAAAC
C9E72_RS14635
2791338
2793710
+
Genic
1789
NZ_CP028592.1
2794465
2794477
AGCGCC
12
-
2
GCGCTG
C9E72_RS14640
2793755
2796550
+
Genic
710
NZ_CP028592.1
2797237
2797249
AGGCGC
12
-
2
TGCGCC
C9E72_RS14645
2796912
2798312
+
Genic
325
NZ_CP028592.1
2797616
2797630
ACATCG
14
+
2
ATCGAC
C9E72_RS14645
2796912
2798312
+
Genic
704
NZ_CP028592.1
2798102
2798116
ACGCAG
14
-
2
CGTCTG
C9E72_RS14645
2796912
2798312
+
Genic
1190
NZ_CP028592.1
2798319
2798332
AACGGT
13
+
2
TAACGG
C9E72_RS14645
2796912
2798312
+
Intergenic
1407
NZ_CP028592.1
2801606
2801618
AATATG
12
+
2
TATGAA
C9E72_RS14655
2800134
2801453
+
Intergenic
1472
NZ_CP028592.1
2804313
2804326
AGCGCC
13
-
2
GCGCTG
dosC
2801830
2803212
+
Intergenic
2483
NZ_CP028592.1
2806039
2806051
ACTGAT
12
-
2
AGTATC
ddpX
2805884
2806465
+
Genic
155
NZ_CP028592.1
2807213
2807226
AATGTC
13
-
2
GACATT
C9E72_RS14675
2806479
2808029
+
Genic
734
NZ_CP028592.1
2807312
2807324
ACAGAT
12
-
2
TATCTG
C9E72_RS14675
2806479
2808029
+
Genic
833
NZ_CP028592.1
2807504
2807516
AAAGCC
12
+
2
AAAGCC
C9E72_RS14675
2806479
2808029
+
Genic
1025
NZ_CP028592.1
2808003
2808015
AATATC
12
+
2
TCAATA
C9E72_RS14675
2806479
2808029
+
Genic
1524
NZ_CP028592.1
2809532
2809545
AATAGC
13
-
2
GCTATT
C9E72_RS14685
2809050
2809946
+
Genic
482
NZ_CP028592.1
2811966
2811978
AAAAGC
12
-
2
TGCTTT
osmC
2811904
2812335
-
Genic
357
NZ_CP028592.1
2812443
2812455
AAATT
12
+
2
TTAAA
osmC
2811904
2812335
-
Intergenic
-108
NZ_CP028592.1
2813186
2813199
AAAAAC
13
-
2
TGTTTT
C9E72_RS14710
2812997
2813134
+
Intergenic
189
NZ_CP028592.1
2813297
2813309
AAAAAC
12
+
2
CAAAAA
C9E72_RS14715
2813291
2814988
+
Genic
6
NZ_CP028592.1
2817227
2817239
AAACAT
12
+
2
AAACAT
fdnI
2816790
2817443
-
Genic
204
NZ_CP028592.1
2820692
2820705
AATGGT
13
-
2
CCATTA
fdnG
2818333
2821380
-
Genic
675
NZ_CP028592.1
2822415
2822428
AACGAG
13
-
2
TCGTTC
yddG
2821612
2822493
+
Genic
803
NZ_CP028592.1
2827297
2827309
AACGAT
12
-
2
TTATCG
C9E72_RS14770
2826907
2828295
+
Genic
390