Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1426 to 1450 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2827429
2827441
AAGTGT
12
+
2
GTGTAA
C9E72_RS14770
2826907
2828295
+
Genic
522
NZ_CP028592.1
2827907
2827919
AAGGT
12
-
2
CCTTA
C9E72_RS14770
2826907
2828295
+
Genic
1000
NZ_CP028592.1
2828048
2828060
AAGATG
12
+
2
GATGAA
C9E72_RS14770
2826907
2828295
+
Genic
1141
NZ_CP028592.1
2831241
2831254
ACTGGC
13
+
2
CTGGCA
C9E72_RS14775
2828377
2832117
+
Genic
2864
NZ_CP028592.1
2831409
2831422
ACCAG
13
-
2
TGGTC
C9E72_RS14775
2828377
2832117
+
Genic
3032
NZ_CP028592.1
2836275
2836287
AAAATG
12
+
2
GAAAAT
C9E72_RS14795
2835109
2836002
+
Intergenic
1166
NZ_CP028592.1
2839471
2839483
AAGCAT
12
-
2
GCTTAT
C9E72_RS14825
2839699
2839908
-
Intergenic
425
NZ_CP028592.1
2839885
2839897
AAAAAG
12
-
2
TCTTTT
C9E72_RS14825
2839699
2839908
-
Genic
11
NZ_CP028592.1
2840058
2840071
AAAAAT
13
+
2
AATAAA
C9E72_RS14830
2839908
2840093
-
Genic
22
NZ_CP028592.1
2840656
2840668
AACCGG
12
-
2
CCGGTT
C9E72_RS14835
2840105
2844307
-
Genic
3639
NZ_CP028592.1
2841222
2841234
ACAGCG
12
+
2
GCGACA
C9E72_RS14835
2840105
2844307
-
Genic
3073
NZ_CP028592.1
2841373
2841387
ACCACT
14
-
2
GTAGTG
C9E72_RS14835
2840105
2844307
-
Genic
2920
NZ_CP028592.1
2843203
2843215
ACCGCT
12
-
2
GTAGCG
C9E72_RS14835
2840105
2844307
-
Genic
1092
NZ_CP028592.1
2844053
2844065
ACCCGG
12
-
2
GTCCGG
C9E72_RS14835
2840105
2844307
-
Genic
242
NZ_CP028592.1
2844200
2844212
ACGCC
12
+
2
CACGC
C9E72_RS14835
2840105
2844307
-
Genic
95
NZ_CP028592.1
2847331
2847344
AATATT
13
+
2
TATTAA
C9E72_RS14845
2847303
2847515
-
Genic
171
NZ_CP028592.1
2848033
2848045
ACTGGC
12
-
2
CCAGTG
C9E72_RS14850
2847591
2848208
-
Genic
163
NZ_CP028592.1
2848485
2848497
ACACCG
12
+
2
CGACAC
ansP
2848475
2849974
+
Genic
10
NZ_CP028592.1
2848657
2848670
ACTGGC
13
+
2
GCACTG
ansP
2848475
2849974
+
Genic
182
NZ_CP028592.1
2851742
2851754
AAGGGC
12
+
2
GGGCAA
C9E72_RS14865
2851392
2853494
+
Genic
350
NZ_CP028592.1
2855579
2855591
ATC
12
+
4
CAT
C9E72_RS14880
2855611
2856129
+
Intergenic
-20
NZ_CP028592.1
2860539
2860552
AGCCCC
13
+
2
CAGCCC
C9E72_RS14915
2859685
2860626
-
Genic
74
NZ_CP028592.1
2861450
2861462
AGAGAT
12
+
2
AGATAG
C9E72_RS14920
2860627
2861640
-
Genic
178
NZ_CP028592.1
2861514
2861526
AGCCGG
12
+
2
GCCGGA
C9E72_RS14920
2860627
2861640
-
Genic
114
NZ_CP028592.1
2863030
2863042
AAATT
12
+
2
AATTA
C9E72_RS14930
2863048
2864454
-
Intergenic
1412