Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1451 to 1475 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
2865270
2865282
AATGC
12
+
2
AATGC
hicA
2864995
2865171
-
Intergenic
-99
NZ_CP028592.1
2868906
2868918
ACGATC
12
-
2
GATCGT
ydcO
2868338
2869549
+
Genic
568
NZ_CP028592.1
2869401
2869413
ACGCTC
12
-
2
TGAGCG
ydcO
2868338
2869549
+
Genic
1063
NZ_CP028592.1
2873449
2873461
AGGGGC
12
-
2
CCCCTG
C9E72_RS14980
2872262
2873242
+
Intergenic
1187
NZ_CP028592.1
2875522
2875534
AATGGG
12
-
2
TCCCAT
C9E72_RS14995
2874200
2875855
-
Genic
321
NZ_CP028592.1
2876533
2876545
ACGCC
12
+
2
GCCAC
C9E72_RS15000
2876080
2877423
-
Genic
878
NZ_CP028592.1
2876654
2876666
CCGCG
12
-
2
CGCGG
C9E72_RS15000
2876080
2877423
-
Genic
757
NZ_CP028592.1
2876888
2876900
ACAGGC
12
-
2
CCTGTG
C9E72_RS15000
2876080
2877423
-
Genic
523
NZ_CP028592.1
2880064
2880076
AATCTC
12
+
2
AATCTC
trg
2878601
2880241
-
Genic
165
NZ_CP028592.1
2880973
2880985
ATCGGC
12
+
2
CGGCAT
C9E72_RS15020
2880861
2881034
-
Genic
49
NZ_CP028592.1
2885675
2885687
AAAAAT
12
-
2
TTTTAT
C9E72_RS15045
2885593
2885970
-
Genic
283
NZ_CP028592.1
2891792
2891804
AACGAT
12
-
2
CGTTAT
C9E72_RS15070
2891530
2892135
+
Genic
262
NZ_CP028592.1
2892812
2892826
ACGCGC
14
+
2
GCACGC
C9E72_RS15075
2892186
2893502
-
Genic
676
NZ_CP028592.1
2895282
2895294
AAAAT
12
+
2
AATAA
C9E72_RS15085
2895265
2896161
-
Genic
867
NZ_CP028592.1
2895973
2895986
AACGTC
13
+
2
AACGTC
C9E72_RS15085
2895265
2896161
-
Genic
175
NZ_CP028592.1
2896442
2896454
AAAAAT
12
+
2
TAAAAA
C9E72_RS15090
2896161
2896766
-
Genic
312
NZ_CP028592.1
2902002
2902014
AATGCC
12
-
2
TGGCAT
C9E72_RS15105
2900387
2902846
-
Genic
832
NZ_CP028592.1
2904773
2904785
ACCATC
12
+
2
CCATCA
C9E72_RS15110
2903066
2906101
-
Genic
1316
NZ_CP028592.1
2904855
2904867
AACGTC
12
+
2
CGTCAA
C9E72_RS15110
2903066
2906101
-
Genic
1234
NZ_CP028592.1
2906313
2906326
AAAAAC
13
+
2
AAAAAC
C9E72_RS15115
2906515
2906838
-
Intergenic
512
NZ_CP028592.1
2906981
2906993
AACC
12
+
3
CAAC
C9E72_RS15120
2906846
2907031
-
Genic
38
NZ_CP028592.1
2913745
2913758
AGCGCC
13
-
2
CTGGCG
nifJ
2911934
2915458
+
Genic
1811
NZ_CP028592.1
2915094
2915107
AAGCGG
13
+
2
GGAAGC
nifJ
2911934
2915458
+
Genic
3160
NZ_CP028592.1
2915261
2915273
AGCGCC
12
-
2
CGCTGG
nifJ
2911934
2915458
+
Genic
3327
NZ_CP028592.1
2920249
2920261
ATCCG
12
-
2
GGATC
C9E72_RS15170
2920084
2920314
+
Genic
165