Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 126 to 150 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
202698
202710
ACGGCG
12
-
2
CCGTCG
mtlR
202362
202949
-
Genic
239
NZ_CP028592.1
203597
203610
AAGCCG
13
+
2
GCCGAA
mtlD
202949
204097
-
Genic
487
NZ_CP028592.1
204667
204682
AAAGTG
15
-
2
CTTTCA
C9E72_RS01050
204192
206105
-
Genic
1423
NZ_CP028592.1
205433
205445
ACCTGG
12
+
2
ACCTGG
C9E72_RS01050
204192
206105
-
Genic
660
NZ_CP028592.1
208141
208154
AGGGGG
13
+
2
GAGGGG
C9E72_RS01060
207007
208143
+
Genic
1134
NZ_CP028592.1
208727
208740
AAAAT
13
-
2
TTTTA
C9E72_RS01065
208602
209039
-
Genic
299
NZ_CP028592.1
211808
211820
ACAGCT
12
-
2
GCTGTA
C9E72_RS01085
210219
214448
-
Genic
2628
NZ_CP028592.1
212320
212332
ACCGC
12
-
2
CGGTG
C9E72_RS01085
210219
214448
-
Genic
2116
NZ_CP028592.1
212782
212794
ACCATG
12
-
2
GGTCAT
C9E72_RS01085
210219
214448
-
Genic
1654
NZ_CP028592.1
213278
213291
ACCATC
13
-
2
GGTGAT
C9E72_RS01085
210219
214448
-
Genic
1157
NZ_CP028592.1
213365
213378
AACGGT
13
+
2
GTAACG
C9E72_RS01085
210219
214448
-
Genic
1070
NZ_CP028592.1
217806
217818
AAACGT
12
+
2
GTAAAC
selB
216771
218615
+
Genic
1035
NZ_CP028592.1
218081
218094
AGGCCC
13
-
2
CCTGGG
selB
216771
218615
+
Genic
1310
NZ_CP028592.1
220384
220396
AGCGCC
12
-
2
GCGCTG
C9E72_RS01110
220085
221380
+
Genic
299
NZ_CP028592.1
223503
223515
AATGC
12
-
2
ATTGC
C9E72_RS01125
223571
223894
+
Intergenic
-56
NZ_CP028592.1
223823
223835
AACTGC
12
+
2
TGCAAC
C9E72_RS01125
223571
223894
+
Genic
252
NZ_CP028592.1
226207
226219
ACCAGC
12
-
2
TGGTGC
C9E72_RS01140
226131
226871
+
Genic
76
NZ_CP028592.1
228994
229006
ACGCTG
12
+
2
TGACGC
C9E72_RS01150
228982
230382
-
Genic
1376
NZ_CP028592.1
234831
234843
AATACG
12
+
2
GAATAC
malS
233723
235753
-
Genic
910
NZ_CP028592.1
235649
235661
AACGGG
12
-
2
GTTCCC
malS
233723
235753
-
Genic
92
NZ_CP028592.1
236584
236596
AAC
12
+
4
CAA
C9E72_RS01180
236073
236897
+
Genic
511
NZ_CP028592.1
238352
238364
ACTCAT
12
+
2
TCATAC
xylH
238261
239442
-
Genic
1078
NZ_CP028592.1
239675
239687
AATGAG
12
+
2
AGAATG
xylG
239420
240961
-
Genic
1274
NZ_CP028592.1
243050
243062
AAACAT
12
+
2
CATAAA
xylA
242397
243719
+
Genic
653
NZ_CP028592.1
248557
248571
AGCGGC
14
-
2
CCGCTG
glyQ
247844
248755
+
Genic
713