Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 176 to 200 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
287862
287874
AGCGCC
12
+
2
CAGCGC
bcsZ
286915
288021
+
Genic
947
NZ_CP028592.1
289165
289177
AGCCCC
12
-
2
GCTGGG
bcsC
288003
291476
+
Genic
1162
NZ_CP028592.1
289772
289784
AAGCGG
12
+
2
GAAGCG
bcsC
288003
291476
+
Genic
1769
NZ_CP028592.1
290031
290043
AGCGCC
12
-
2
TGGCGC
bcsC
288003
291476
+
Genic
2028
NZ_CP028592.1
290038
290051
AGGCGC
13
+
2
GGCGCA
bcsC
288003
291476
+
Genic
2035
NZ_CP028592.1
294072
294084
ACCGCT
12
-
2
AGCGGT
C9E72_RS01435
293729
295015
+
Genic
343
NZ_CP028592.1
299822
299834
AGCGAT
12
+
2
GCGATA
C9E72_RS01455
298826
300886
+
Genic
996
NZ_CP028592.1
300273
300286
AAACTG
13
+
2
ACTGAA
C9E72_RS01455
298826
300886
+
Genic
1447
NZ_CP028592.1
300353
300365
ACCGCT
12
-
2
GCGGTA
C9E72_RS01455
298826
300886
+
Genic
1527
NZ_CP028592.1
301948
301960
CCGCG
12
+
2
GCGCC
C9E72_RS01460
301068
302390
-
Genic
430
NZ_CP028592.1
301998
302010
AGCGCC
12
+
2
GCCAGC
C9E72_RS01460
301068
302390
-
Genic
380
NZ_CP028592.1
303887
303899
AGCC
12
+
3
GCCA
C9E72_RS01470
303864
304763
-
Genic
864
NZ_CP028592.1
307756
307768
AAAATG
12
-
2
TTTTCA
treF
305936
307585
-
Intergenic
-171
NZ_CP028592.1
308662
308674
AACACC
12
-
2
TTGGTG
C9E72_RS01485
307990
309387
+
Genic
672
NZ_CP028592.1
309923
309935
AGGCGC
12
-
2
TGCGCC
C9E72_RS01490
309598
310998
+
Genic
325
NZ_CP028592.1
310302
310316
ACATCG
14
+
2
ATCGAC
C9E72_RS01490
309598
310998
+
Genic
704
NZ_CP028592.1
310788
310802
ACGCAG
14
-
2
CGTCTG
C9E72_RS01490
309598
310998
+
Genic
1190
NZ_CP028592.1
312519
312531
AAATTG
12
+
2
TGAAAT
gadW
312561
313289
+
Intergenic
-30
NZ_CP028592.1
314104
314117
AGGGCG
13
+
2
GGCGAG
C9E72_RS01505
313652
316765
-
Genic
2648
NZ_CP028592.1
318417
318429
AAAAAT
12
-
2
ATTTTT
gadE
318286
318813
-
Genic
384
NZ_CP028592.1
318778
318790
AAAAG
12
+
2
AAAAG
gadE
318286
318813
-
Genic
23
NZ_CP028592.1
321655
321667
ACCAGC
12
-
2
TGCTGG
C9E72_RS01540
321277
321924
+
Genic
378
NZ_CP028592.1
323397
323410
ACCAGC
13
+
2
AGCACC
C9E72_RS01550
322743
323699
-
Genic
289
NZ_CP028592.1
324292
324304
ATCGGC
12
+
2
CGGCAT
chuY
323784
324407
-
Genic
103
NZ_CP028592.1
324335
324347
AGCGCC
12
+
2
CGCCAG
chuY
323784
324407
-
Genic
60