Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 226 to 250 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
367941
367953
ACCAGC
12
+
2
CCAGCA
nikC
367694
368527
-
Genic
574
NZ_CP028592.1
368101
368113
ATCGCC
12
-
2
GGCGAT
nikC
367694
368527
-
Genic
414
NZ_CP028592.1
370025
370038
AAAGCG
13
-
2
CGCTTT
nikA
369468
371042
-
Genic
1004
NZ_CP028592.1
376143
376158
ACCAGC
15
+
2
AGCACC
C9E72_RS01810
375912
378230
-
Genic
2072
NZ_CP028592.1
376913
376925
AGCGCC
12
+
2
CAGCGC
C9E72_RS01810
375912
378230
-
Genic
1305
NZ_CP028592.1
377276
377288
AGCATG
12
-
2
GCTCAT
C9E72_RS01810
375912
378230
-
Genic
942
NZ_CP028592.1
377351
377364
ATCGGC
13
-
2
GCCGAT
C9E72_RS01810
375912
378230
-
Genic
866
NZ_CP028592.1
381427
381439
ACCAGC
12
+
2
CCAGCA
C9E72_RS01835
381234
382595
-
Genic
1156
NZ_CP028592.1
387553
387565
AGCCCC
12
+
2
CCAGCC
C9E72_RS01875
387150
388199
-
Genic
634
NZ_CP028592.1
388812
388826
ATCGCC
14
-
2
GGCGAT
C9E72_RS01880
388331
389548
+
Genic
481
NZ_CP028592.1
388870
388882
AACGCT
12
-
2
GCGTTA
C9E72_RS01880
388331
389548
+
Genic
539
NZ_CP028592.1
389848
389860
ACGATG
12
+
2
GATGAC
dcrB
389552
390109
-
Genic
249
NZ_CP028592.1
391940
391952
AATGC
12
+
2
TGCAA
zntA
391415
393613
-
Genic
1661
NZ_CP028592.1
395223
395236
AGCC
13
+
3
CAGC
rsmD
395075
395671
-
Genic
435
NZ_CP028592.1
396056
396068
AAAATG
12
+
2
TGAAAA
ftsY
395821
397317
+
Genic
235
NZ_CP028592.1
396097
396109
AACCGG
12
+
2
AACCGG
ftsY
395821
397317
+
Genic
276
NZ_CP028592.1
399303
399315
AAAGCT
12
-
2
TTTAGC
rpoH
399284
400138
+
Genic
19
NZ_CP028592.1
400178
400190
AAAAAC
12
-
2
GTTTTT
rpoH
399284
400138
+
Intergenic
894
NZ_CP028592.1
400509
400521
ACCGG
12
-
2
GTCCG
C9E72_RS01945
400409
401512
+
Genic
100
NZ_CP028592.1
400742
400754
AAGACG
12
+
2
ACGAAG
C9E72_RS01945
400409
401512
+
Genic
333
NZ_CP028592.1
402159
402171
AAATCG
12
+
2
TCGAAA
C9E72_RS01955
401935
402462
+
Genic
224
NZ_CP028592.1
404229
404241
AGCGCC
12
-
2
CGCTGG
livk
403266
404375
+
Genic
963
NZ_CP028592.1
405754
405766
ACCAGC
12
-
2
TGCTGG
C9E72_RS01975
405346
406623
+
Genic
408
NZ_CP028592.1
405866
405880
CCG
14
-
4
GGC
C9E72_RS01975
405346
406623
+
Genic
520
NZ_CP028592.1
410465
410477
AACGGC
12
-
2
GCCGTT
ugpB
409327
410643
+
Genic
1138