Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 276 to 300 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
490168
490180
ACCGAT
12
-
2
ATCGGT
damX
489818
491104
+
Genic
350
NZ_CP028592.1
490517
490529
AATGGC
12
+
2
GCAATG
damX
489818
491104
+
Genic
699
NZ_CP028592.1
495741
495754
AAAGGC
13
+
2
AGGCAA
phoB
494621
495352
-
Intergenic
-389
NZ_CP028592.1
496553
496566
AGCGCC
13
+
2
CCAGCG
frlC
496237
497064
-
Genic
498
NZ_CP028592.1
497345
497358
AACAGG
13
+
2
CAGGAA
frlB
497115
498137
-
Genic
779
NZ_CP028592.1
499825
499838
AAATAG
13
+
2
TAGAAA
C9E72_RS02385
499791
499958
-
Genic
120
NZ_CP028592.1
505689
505701
ACCGTC
12
-
2
TGACGG
tsgA
505665
506846
-
Genic
1145
NZ_CP028592.1
506693
506706
AAGGTG
13
+
2
GAAGGT
tsgA
505665
506846
-
Genic
140
NZ_CP028592.1
507841
507853
AATCGT
12
+
2
CGTAAT
C9E72_RS02425
507794
507961
+
Genic
47
NZ_CP028592.1
509048
509060
ATCGCC
12
+
2
TCGCCA
pabA
508585
509148
+
Genic
463
NZ_CP028592.1
509819
509831
AGGGCG
12
+
2
AGGGCG
C9E72_RS02440
509234
510454
+
Genic
585
NZ_CP028592.1
514860
514873
ACC
13
-
4
TGG
C9E72_RS02460
514055
514924
-
Genic
51
NZ_CP028592.1
516734
516747
AAGGTC
13
+
2
TCAAGG
C9E72_RS02475
516212
518125
-
Genic
1378
NZ_CP028592.1
517519
517531
AGGATC
12
+
2
GATCAG
C9E72_RS02475
516212
518125
-
Genic
594
NZ_CP028592.1
517576
517588
AGATCG
12
+
2
ATCGAG
C9E72_RS02475
516212
518125
-
Genic
537
NZ_CP028592.1
518056
518068
ACCGCC
12
-
2
GGTGGC
C9E72_RS02475
516212
518125
-
Genic
57
NZ_CP028592.1
518166
518178
AATGT
12
+
2
TAATG
C9E72_RS02475
516212
518125
-
Intergenic
-41
NZ_CP028592.1
519882
519895
ACCGTC
13
-
2
GGTGAC
kefB
518807
520585
+
Genic
1075
NZ_CP028592.1
520706
520718
AATATC
12
-
2
ATATTG
C9E72_RS02490
520622
520822
+
Genic
84
NZ_CP028592.1
521399
521411
ACCACG
12
+
2
CACGAC
C9E72_RS02495
520917
521507
+
Genic
482
NZ_CP028592.1
521487
521501
AACCGC
14
-
2
GCGGTT
C9E72_RS02495
520917
521507
+
Genic
570
NZ_CP028592.1
521563
521575
ACCGCC
12
-
2
GTGGCG
C9E72_RS02500
521556
521774
-
Genic
199
NZ_CP028592.1
521604
521616
AGCC
12
-
3
GGCT
C9E72_RS02500
521556
521774
-
Genic
158
NZ_CP028592.1
525096
525108
AGGATC
12
-
2
TGATCC
rpsL
524862
525236
+
Genic
234
NZ_CP028592.1
526057
526072
AGCAGG
15
+
2
GGAGCA
fusA
525900
528014
+
Genic
157