Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 251 to 275 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
412883
412897
ACGCTG
14
-
2
GTCAGC
C9E72_RS02010
412472
413542
+
Genic
411
NZ_CP028592.1
413744
413756
AACTG
12
+
2
TGAAC
ugpQ
413539
414282
+
Genic
205
NZ_CP028592.1
413891
413903
ACTGGC
12
+
2
CACTGG
ugpQ
413539
414282
+
Genic
352
NZ_CP028592.1
416037
416049
ACCGCC
12
-
2
GCGGTG
C9E72_RS02025
414829
416574
+
Genic
1208
NZ_CP028592.1
419014
419026
AATGAG
12
+
2
GAATGA
C9E72_RS02040
418430
418918
-
Intergenic
-96
NZ_CP028592.1
420558
420570
AGGGC
12
+
2
GCAGG
C9E72_RS02050
420412
421107
+
Genic
146
NZ_CP028592.1
420694
420706
ACCCGT
12
-
2
CGGGTA
C9E72_RS02050
420412
421107
+
Genic
282
NZ_CP028592.1
423702
423714
ACCAGC
12
-
2
GCTGGT
gntU
422996
424336
+
Genic
706
NZ_CP028592.1
426755
426767
AACCGC
12
+
2
CCGCAA
C9E72_RS02085
426507
427802
+
Genic
248
NZ_CP028592.1
429047
429059
AACATC
12
-
2
TGATGT
asd
428633
429736
+
Genic
414
NZ_CP028592.1
443837
443850
ACGAGT
13
+
2
ACGAGT
C9E72_RS02140
442845
444350
-
Genic
500
NZ_CP028592.1
444718
444731
ACCATC
13
-
2
GGTGAT
glpE
444540
444866
+
Genic
178
NZ_CP028592.1
445726
445738
AAAACG
12
+
2
CGAAAA
glpG
444911
445741
+
Genic
815
NZ_CP028592.1
447933
447946
AGCGCG
13
+
2
GCGAGC
C9E72_RS02160
446498
448096
-
Genic
150
NZ_CP028592.1
460791
460803
AAATTT
12
+
2
TAAATT
C9E72_RS02205
460948
461523
-
Intergenic
720
NZ_CP028592.1
463582
463594
AGGGAT
12
+
2
ATAGGG
rpnA
463100
463978
-
Genic
384
NZ_CP028592.1
465531
465543
AAACCG
12
+
2
AACCGA
feoB
464417
466738
-
Genic
1195
NZ_CP028592.1
474039
474051
AAAGGC
12
-
2
CCTTTG
pckA
472686
474308
-
Genic
257
NZ_CP028592.1
474138
474150
AACGGC
12
+
2
ACGGCA
pckA
472686
474308
-
Genic
158
NZ_CP028592.1
475073
475085
AGCGAT
12
-
2
CGCTAT
C9E72_RS02265
474687
476411
+
Genic
386
NZ_CP028592.1
479340
479354
AATGGT
14
+
2
TGGTAA
igaA
478522
480657
-
Genic
1303
NZ_CP028592.1
481152
481166
AGGATC
14
-
2
CCTGAT
nudE
480977
481537
+
Genic
175
NZ_CP028592.1
482564
482576
AGCGCC
12
+
2
CCAGCG
mrcA
481702
484254
-
Genic
1678
NZ_CP028592.1
484420
484432
ACCGCT
12
-
2
AGCGGT
hofM
484374
485168
+
Genic
46
NZ_CP028592.1
486796
486808
ACGCCG
12
+
2
ACGCCG
hofQ
486421
487659
+
Genic
375