Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1526 to 1550 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3037454
3037466
AATGAG
12
-
2
CATTCT
C9E72_RS15720
3036541
3039783
-
Genic
2317
NZ_CP028592.1
3037980
3037993
AGCCCC
13
+
2
CCCCAG
C9E72_RS15720
3036541
3039783
-
Genic
1790
NZ_CP028592.1
3039893
3039905
AGGATG
12
-
2
ATCCTC
C9E72_RS15725
3039831
3040040
-
Genic
135
NZ_CP028592.1
3040949
3040961
AATGAC
12
-
2
TGTCAT
C9E72_RS15735
3040516
3041232
-
Genic
271
NZ_CP028592.1
3043352
3043364
ACCGGT
12
+
2
CCGGTA
C9E72_RS15760
3042841
3045342
-
Genic
1978
NZ_CP028592.1
3043514
3043526
ACCGGT
12
+
2
CCGGTA
C9E72_RS15760
3042841
3045342
-
Genic
1816
NZ_CP028592.1
3045592
3045605
ACCGCC
13
+
2
CACCGC
C9E72_RS15770
3045554
3047491
-
Genic
1886
NZ_CP028592.1
3045802
3045815
ACCAGC
13
+
2
CACCAG
C9E72_RS15770
3045554
3047491
-
Genic
1676
NZ_CP028592.1
3046010
3046023
ATCCGC
13
+
2
GCATCC
C9E72_RS15770
3045554
3047491
-
Genic
1468
NZ_CP028592.1
3048072
3048084
AGCCC
12
+
2
CCCAG
C9E72_RS15775
3047555
3049216
-
Genic
1132
NZ_CP028592.1
3048228
3048240
CCCCCG
12
+
2
CCGCCC
C9E72_RS15775
3047555
3049216
-
Genic
976
NZ_CP028592.1
3048951
3048963
AAGGAT
12
+
2
GGATAA
C9E72_RS15775
3047555
3049216
-
Genic
253
NZ_CP028592.1
3049252
3049264
ACCGCC
12
-
2
GGTGGC
C9E72_RS15780
3049213
3049776
-
Genic
512
NZ_CP028592.1
3049594
3049606
ACCTCC
12
+
2
TCCACC
C9E72_RS15780
3049213
3049776
-
Genic
170
NZ_CP028592.1
3050782
3050794
AAAAAT
12
+
2
AATAAA
C9E72_RS15795
3050473
3050700
+
Intergenic
309
NZ_CP028592.1
3053384
3053397
AACAGT
13
+
2
ACAGTA
C9E72_RS15825
3053108
3053452
-
Genic
55
NZ_CP028592.1
3053899
3053913
ACGCTG
14
-
2
CGTCAG
C9E72_RS15835
3053822
3055675
-
Genic
1762
NZ_CP028592.1
3056190
3056203
ACACC
13
-
2
GTGTG
C9E72_RS15845
3056199
3056275
-
Genic
72
NZ_CP028592.1
3056585
3056598
ACCCCG
13
+
2
CGACCC
C9E72_RS15855
3056472
3057530
-
Genic
932
NZ_CP028592.1
3059199
3059211
ACCATG
12
+
2
TGACCA
C9E72_RS15875
3059031
3060077
-
Genic
866
NZ_CP028592.1
3059960
3059973
AGCCGG
13
-
2
CGGCTC
C9E72_RS15875
3059031
3060077
-
Genic
104
NZ_CP028592.1
3060809
3060821
AAAAAC
12
+
2
AAAAAC
C9E72_RS15890
3060905
3061117
-
Intergenic
296
NZ_CP028592.1
3063407
3063420
AATGGC
13
-
2
ATTGCC
C9E72_RS15910
3063014
3063595
-
Genic
175
NZ_CP028592.1
3069309
3069321
ATCCG
12
+
2
ATCCG
C9E72_RS15985
3069017
3071488
+
Genic
292
NZ_CP028592.1
3070539
3070552
AACCAG
13
+
2
GAACCA
C9E72_RS15985
3069017
3071488
+
Genic
1522