Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1551 to 1575 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3075219
3075231
AGATAT
12
-
2
TATCTA
C9E72_RS16015
3074723
3075262
+
Genic
496
NZ_CP028592.1
3075433
3075445
AATGCC
12
+
2
CCAATG
yciA
3075367
3075765
+
Genic
66
NZ_CP028592.1
3075987
3075999
AAAGTT
12
-
2
TTTAAC
tonB
3075805
3076524
-
Genic
525
NZ_CP028592.1
3076130
3076142
ACCGGC
12
-
2
GTGCCG
tonB
3075805
3076524
-
Genic
382
NZ_CP028592.1
3076240
3076254
AAGCCG
14
-
2
TTCGGC
tonB
3075805
3076524
-
Genic
270
NZ_CP028592.1
3076397
3076410
AGGCGC
13
+
2
GCGCAG
tonB
3075805
3076524
-
Genic
114
NZ_CP028592.1
3076603
3076615
AGGATC
12
+
2
GATCAG
tonB
3075805
3076524
-
Intergenic
-79
NZ_CP028592.1
3078399
3078411
AAGATT
12
+
2
TAAGAT
C9E72_RS16035
3077345
3078598
+
Genic
1054
NZ_CP028592.1
3078863
3078875
CCCCCG
12
+
2
CCCCCG
C9E72_RS16040
3078653
3078826
-
Intergenic
-37
NZ_CP028592.1
3079646
3079658
ATCATG
12
+
2
ATGATC
cls
3078969
3080429
+
Genic
677
NZ_CP028592.1
3080462
3080475
ATATCC
13
-
2
TATGGA
C9E72_RS16050
3080464
3080793
+
Genic
-2
NZ_CP028592.1
3083636
3083648
ACCAGC
12
+
2
CAGCAC
oppC
3082872
3083780
-
Genic
132
NZ_CP028592.1
3085484
3085497
ACACGC
13
+
2
ACGCAC
oppA
3084801
3086432
-
Genic
935
NZ_CP028592.1
3087082
3087094
AAAAGC
12
-
2
CTTTTG
ychE
3087170
3087817
-
Intergenic
723
NZ_CP028592.1
3092976
3092988
AAGAAT
12
+
2
AATAAG
galU
3093048
3093956
-
Intergenic
968
NZ_CP028592.1
3093523
3093535
AATATG
12
-
2
ATTCAT
galU
3093048
3093956
-
Genic
421
NZ_CP028592.1
3094218
3094230
ATCGC
12
+
2
GCATC
rssB
3094158
3095171
-
Genic
941
NZ_CP028592.1
3094760
3094772
AAGAGG
12
-
2
TTCCTC
rssB
3094158
3095171
-
Genic
399
NZ_CP028592.1
3100601
3100613
AGCGGC
12
+
2
GCAGCG
narH
3100093
3101631
-
Genic
1018
NZ_CP028592.1
3100618
3100630
AATGG
12
-
2
TTCCA
narH
3100093
3101631
-
Genic
1001
NZ_CP028592.1
3100762
3100774
AACGAG
12
-
2
TTCTCG
narH
3100093
3101631
-
Genic
857
NZ_CP028592.1
3102043
3102055
AGCATC
12
+
2
TCAGCA
C9E72_RS16165
3101628
3105371
-
Genic
3316
NZ_CP028592.1
3102322
3102336
ACCAG
14
+
2
CCAGA
C9E72_RS16165
3101628
3105371
-
Genic
3035
NZ_CP028592.1
3106614
3106626
AACGCT
12
+
2
TAACGC
narK
3105764
3107155
-
Genic
529
NZ_CP028592.1
3107386
3107398
ACCCAT
12
-
2
GGGTAT
narX
3107494
3109290
+
Intergenic
-96