Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1601 to 1625 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3167605
3167617
AGCGCC
12
-
2
GCGCTG
C9E72_RS16505
3167194
3170109
-
Genic
2492
NZ_CP028592.1
3168093
3168105
AATGGT
12
-
2
ATTACC
C9E72_RS16505
3167194
3170109
-
Genic
2004
NZ_CP028592.1
3170843
3170856
ACTGAT
13
+
2
CTGATA
C9E72_RS16515
3170840
3174238
-
Genic
3382
NZ_CP028592.1
3170947
3170959
ACACTG
12
-
2
TGTCAG
C9E72_RS16515
3170840
3174238
-
Genic
3279
NZ_CP028592.1
3171899
3171911
AATATC
12
-
2
TTGATA
C9E72_RS16515
3170840
3174238
-
Genic
2327
NZ_CP028592.1
3172718
3172730
ACGCTG
12
-
2
AGCGTC
C9E72_RS16515
3170840
3174238
-
Genic
1508
NZ_CP028592.1
3174013
3174025
AGCAGG
12
-
2
CTGCTC
C9E72_RS16515
3170840
3174238
-
Genic
213
NZ_CP028592.1
3175791
3175803
ACCTGC
12
-
2
CAGGTG
C9E72_RS16530
3175617
3176315
-
Genic
512
NZ_CP028592.1
3184053
3184066
ACCGGC
13
-
2
CGGTGC
C9E72_RS16590
3183994
3185313
-
Genic
1247
NZ_CP028592.1
3187776
3187788
ATCCCC
12
+
2
CCCCAT
C9E72_RS16605
3187095
3189020
-
Genic
1232
NZ_CP028592.1
3188622
3188634
AGCGCC
12
+
2
GCCAGC
C9E72_RS16605
3187095
3189020
-
Genic
386
NZ_CP028592.1
3190218
3190230
ACAGTG
12
+
2
TGACAG
C9E72_RS16620
3190288
3190494
-
Intergenic
264
NZ_CP028592.1
3193249
3193261
AAACAG
12
+
2
CAGAAA
C9E72_RS16655
3193355
3194044
-
Intergenic
783
NZ_CP028592.1
3194333
3194346
ACGGCG
13
+
2
ACGGCG
rusA
3194178
3194540
-
Genic
194
NZ_CP028592.1
3195900
3195912
AAAGT
12
-
2
TTACT
C9E72_RS16690
3195947
3197473
-
Intergenic
1561
NZ_CP028592.1
3201808
3201822
ACCGAT
14
+
2
CGATAC
C9E72_RS16730
3201525
3202775
-
Genic
953
NZ_CP028592.1
3202182
3202194
ACCGAT
12
+
2
ATACCG
C9E72_RS16730
3201525
3202775
-
Genic
581
NZ_CP028592.1
3203865
3203877
AAGCTC
12
-
2
TTGAGC
nudJ
3203610
3204071
+
Genic
255
NZ_CP028592.1
3204272
3204284
AGCGGC
12
+
2
CAGCGG
mnmA
3204125
3205231
+
Genic
147
NZ_CP028592.1
3205213
3205225
AGCGGC
12
-
2
CTGCCG
mnmA
3204125
3205231
+
Genic
1088
NZ_CP028592.1
3207357
3207369
AGGGG
12
-
2
CCTCC
purB
3205912
3207282
+
Intergenic
1445
NZ_CP028592.1
3211347
3211359
AAAGAT
12
-
2
TCTTTA
C9E72_RS16780
3211264
3211512
+
Genic
83
NZ_CP028592.1
3215007
3215019
AAATTG
12
+
2
TGAAAT
C9E72_RS16800
3214844
3215098
+
Genic
163
NZ_CP028592.1
3216219
3216231
AAAACC
12
+
2
CAAAAC
C9E72_RS16820
3215960
3216490
+
Genic
259
NZ_CP028592.1
3223180
3223194
ACAGCG
14
+
2
ACAGCG
C9E72_RS16905
3222820
3223401
+
Genic
360