Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1626 to 1650 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
3224565
3224577
AGCAGG
12
+
2
AGCAGG
C9E72_RS16910
3223401
3225065
+
Genic
1164
NZ_CP028592.1
3227182
3227194
AGCGGC
12
-
2
CTGCCG
C9E72_RS16920
3226638
3227963
+
Genic
544
NZ_CP028592.1
3229733
3229745
ACCGTG
12
+
2
ACCGTG
C9E72_RS16930
3228732
3229856
+
Genic
1001
NZ_CP028592.1
3230771
3230783
AGCTCC
12
-
2
AGCTGG
C9E72_RS16935
3229856
3230803
+
Genic
915
NZ_CP028592.1
3231124
3231195
AAGCCG
71
+
11
AGCCGA
C9E72_RS16940
3230847
3231251
+
Genic
277
NZ_CP028592.1
3234567
3234581
AAGCAG
14
+
2
GCAGAA
C9E72_RS16970
3234358
3234834
+
Genic
209
NZ_CP028592.1
3236584
3236596
AGCCCC
12
-
2
TGGGGC
C9E72_RS16980
3234961
3237036
+
Genic
1623
NZ_CP028592.1
3236960
3236973
AATATC
13
-
2
TATTGA
C9E72_RS16980
3234961
3237036
+
Genic
1999
NZ_CP028592.1
3238548
3238560
AGCC
12
-
3
CTGG
C9E72_RS16990
3238356
3239480
+
Genic
192
NZ_CP028592.1
3238904
3238916
ACGCTG
12
+
2
ACGCTG
C9E72_RS16990
3238356
3239480
+
Genic
548
NZ_CP028592.1
3239396
3239409
AAGCGG
13
+
2
AGCGGA
C9E72_RS16990
3238356
3239480
+
Genic
1040
NZ_CP028592.1
3245829
3245841
AAAAAC
12
+
2
ACAAAA
C9E72_RS17040
3244779
3246818
+
Genic
1050
NZ_CP028592.1
3246871
3246883
AAAAAT
12
+
2
AAAATA
C9E72_RS17040
3244779
3246818
+
Intergenic
2092
NZ_CP028592.1
3249590
3249602
ACTGGC
12
+
2
CTGGCA
C9E72_RS17075
3249497
3250039
-
Genic
437
NZ_CP028592.1
3249765
3249779
ATCGCG
14
+
2
CGCGAT
C9E72_RS17075
3249497
3250039
-
Genic
260
NZ_CP028592.1
3250125
3250140
ACC
15
+
5
ACC
C9E72_RS17075
3249497
3250039
-
Intergenic
-86
NZ_CP028592.1
3254269
3254281
ACC
12
+
4
CCA
C9E72_RS17130
3254025
3255425
-
Genic
1144
NZ_CP028592.1
3254683
3254695
AACATC
12
+
2
CATCAA
C9E72_RS17130
3254025
3255425
-
Genic
730
NZ_CP028592.1
3260539
3260551
AAGCAG
12
+
2
GCAGAA
C9E72_RS17175
3259383
3260596
+
Genic
1156
NZ_CP028592.1
3262475
3262487
AAACGT
12
-
2
TTTACG
pepT
3262128
3263354
-
Genic
867
NZ_CP028592.1
3262798
3262810
AACATC
12
+
2
CATCAA
pepT
3262128
3263354
-
Genic
544
NZ_CP028592.1
3264613
3264625
ACCATC
12
-
2
GATGGT
potA
3263604
3264740
+
Genic
1009
NZ_CP028592.1
3267569
3267581
AAAACT
12
+
2
AAAACT
C9E72_RS17215
3267373
3267648
+
Genic
196
NZ_CP028592.1
3267825
3267837
AAAATT
12
+
2
TAAAAT
C9E72_RS17220
3267728
3267853
-
Genic
16
NZ_CP028592.1
3271945
3271957
AATGAT
12
+
2
ATGATA
espN
3269957
3273358
-
Genic
1401