Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2176 to 2200 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4197380
4197392
ACCGTC
12
-
2
GTGACG
C9E72_RS22030
4201721
4203076
-
Intergenic
5684
NZ_CP028592.1
4197985
4198000
ACCGTC
15
-
2
GGTGAC
C9E72_RS22030
4201721
4203076
-
Intergenic
5076
NZ_CP028592.1
4201151
4201163
ATCGCC
12
+
2
TCGCCA
C9E72_RS22030
4201721
4203076
-
Intergenic
1913
NZ_CP028592.1
4203769
4203781
AACGCG
12
-
2
GTTCGC
C9E72_RS22035
4203414
4204706
-
Genic
925
NZ_CP028592.1
4203967
4203979
AGCGCC
12
+
2
CCAGCG
C9E72_RS22035
4203414
4204706
-
Genic
727
NZ_CP028592.1
4206186
4206199
ACGATG
13
+
2
CGATGA
copA
4205903
4208407
+
Genic
283
NZ_CP028592.1
4207046
4207059
AAGGCG
13
+
2
AAGGCG
copA
4205903
4208407
+
Genic
1143
NZ_CP028592.1
4210624
4210636
ACCTC
12
+
2
CTCAC
C9E72_RS22070
4210615
4212267
-
Genic
1631
NZ_CP028592.1
4214633
4214646
AGCGCC
13
-
2
GCTGGC
C9E72_RS22080
4213942
4215618
+
Genic
691
NZ_CP028592.1
4219336
4219349
AAGCGG
13
-
2
CCGCTT
C9E72_RS22100
4219257
4219961
-
Genic
612
NZ_CP028592.1
4223802
4223814
AACCGC
12
-
2
TTGCGG
C9E72_RS22120
4223053
4224984
-
Genic
1170
NZ_CP028592.1
4225428
4225440
ACCCAG
12
+
2
CCCAGA
C9E72_RS22125
4225113
4225664
-
Genic
224
NZ_CP028592.1
4225743
4225755
AGGCGC
12
-
2
CGCCTG
C9E72_RS22130
4225817
4226194
-
Intergenic
439
NZ_CP028592.1
4226156
4226168
AGCC
12
+
3
GCCA
C9E72_RS22130
4225817
4226194
-
Genic
26
NZ_CP028592.1
4226456
4226468
AACAGC
12
+
2
AGCAAC
priC
4226264
4226791
+
Genic
192
NZ_CP028592.1
4227590
4227603
AAAACC
13
+
2
AAACCA
mscK
4227008
4230370
-
Genic
2767
NZ_CP028592.1
4228945
4228958
ACTGGG
13
-
2
CCAGTC
mscK
4227008
4230370
-
Genic
1412
NZ_CP028592.1
4230299
4230311
AAAAAC
12
+
2
ACAAAA
mscK
4227008
4230370
-
Genic
59
NZ_CP028592.1
4234340
4234352
AAGCCG
12
-
2
CGGCTT
C9E72_RS22160
4232503
4235652
+
Genic
1837
NZ_CP028592.1
4234538
4234550
AAAGTC
12
-
2
CTTTGA
C9E72_RS22160
4232503
4235652
+
Genic
2035
NZ_CP028592.1
4236995
4237007
AAAAAG
12
+
2
AGAAAA
C9E72_RS22175
4236988
4237539
+
Genic
7
NZ_CP028592.1
4239688
4239701
AAACTG
13
+
2
ACTGAA
pdeB
4238289
4239839
+
Genic
1399
NZ_CP028592.1
4243723
4243736
ACCGTC
13
+
2
CGTCAC
amtB
4242656
4243942
-
Genic
206
NZ_CP028592.1
4244000
4244013
AATACG
13
+
2
TACGAA
glnK
4243972
4244310
-
Genic
297
NZ_CP028592.1
4244418
4244430
AAAATG
12
+
2
TGAAAA
C9E72_RS22225
4244491
4246272
-
Intergenic
1842