Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2201 to 2225 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4247153
4247165
AGCGCC
12
+
2
GCCAGC
C9E72_RS22230
4246265
4248037
-
Genic
872
NZ_CP028592.1
4249660
4249673
ACCGTC
13
+
2
ACCGTC
C9E72_RS22245
4249595
4251295
+
Genic
65
NZ_CP028592.1
4251188
4251200
ACTATC
12
+
2
ACTATC
C9E72_RS22245
4249595
4251295
+
Genic
1593
NZ_CP028592.1
4253354
4253368
ACTGCC
14
-
2
TGGCAG
ppiD
4253133
4255004
-
Genic
1636
NZ_CP028592.1
4254333
4254346
AAAAAC
13
-
2
TTGTTT
ppiD
4253133
4255004
-
Genic
658
NZ_CP028592.1
4254337
4254349
AAAAC
12
-
2
TTTTG
ppiD
4253133
4255004
-
Genic
655
NZ_CP028592.1
4256028
4256041
ACGTCC
13
-
2
ACGTGG
C9E72_RS22275
4255677
4258031
-
Genic
1990
NZ_CP028592.1
4259635
4259647
AATCG
12
+
2
GAATC
clpP
4259619
4260242
-
Genic
595
NZ_CP028592.1
4260536
4260549
AAAGCG
13
-
2
CTTTCG
C9E72_RS22290
4260487
4261785
-
Genic
1236
NZ_CP028592.1
4261640
4261652
AAAGGC
12
-
2
CTTTGC
C9E72_RS22290
4260487
4261785
-
Genic
133
NZ_CP028592.1
4262045
4262057
AAAAC
12
+
2
ACAAA
bolA
4262129
4262446
-
Intergenic
389
NZ_CP028592.1
4266685
4266697
AACGGG
12
-
2
CGTTCC
C9E72_RS22315
4266277
4268268
+
Genic
408
NZ_CP028592.1
4267140
4267152
AGGATC
12
-
2
ATCCTG
C9E72_RS22315
4266277
4268268
+
Genic
863
NZ_CP028592.1
4273199
4273211
CCCGCG
12
+
2
CCGCGC
panE
4272403
4273314
+
Genic
796
NZ_CP028592.1
4274172
4274184
AAGTGG
12
-
2
TTCCAC
thiI
4273921
4275369
-
Genic
1185
NZ_CP028592.1
4274903
4274915
AAGTGG
12
-
2
CTTCCA
thiI
4273921
4275369
-
Genic
454
NZ_CP028592.1
4275128
4275140
AAGTCG
12
-
2
CTTCGA
thiI
4273921
4275369
-
Genic
229
NZ_CP028592.1
4275304
4275317
AAGCGC
13
+
2
AAGCGC
thiI
4273921
4275369
-
Genic
52
NZ_CP028592.1
4280618
4280630
AAAAAG
12
+
2
AAAGAA
C9E72_RS22380
4279863
4281434
+
Genic
755
NZ_CP028592.1
4284417
4284429
AGATCC
12
+
2
CCAGAT
ribD
4284158
4285261
-
Genic
832
NZ_CP028592.1
4287517
4287530
AACGGC
13
+
2
CGGCAA
C9E72_RS22420
4286703
4287587
+
Genic
814
NZ_CP028592.1
4290226
4290239
AAGATC
13
+
2
GATCAA
secD
4289849
4291696
-
Genic
1457
NZ_CP028592.1
4291979
4291991
AAAATC
12
+
2
ATCAAA
yajC
4291724
4292056
-
Genic
65
NZ_CP028592.1
4292070
4292083
AATATT
13
+
2
TATTAA
tgt
4292079
4293206
-
Genic
1123
NZ_CP028592.1
4293880
4293892
AGCGGC
12
+
2
GCGGCA
queA
4293261
4294331
-
Genic
439