Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2251 to 2275 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4339259
4339271
AAAATG
12
-
2
TTTCAT
C9E72_RS22660
4339284
4340600
+
Intergenic
-13
NZ_CP028592.1
4342500
4342512
AACACC
12
+
2
ACCAAC
C9E72_RS22670
4341697
4343775
+
Genic
803
NZ_CP028592.1
4348647
4348659
ACAGCC
12
+
2
CACAGC
mhpT
4348104
4349315
-
Genic
656
NZ_CP028592.1
4349657
4349669
AGCGCC
12
+
2
CCAGCG
dmpG
4349491
4350504
-
Genic
835
NZ_CP028592.1
4352382
4352394
ACGCAG
12
+
2
GCAGAC
C9E72_RS22720
4352267
4353133
-
Genic
739
NZ_CP028592.1
4354191
4354203
ACCGCC
12
-
2
TGGCGG
C9E72_RS22730
4354097
4355761
-
Genic
1558
NZ_CP028592.1
4354527
4354539
AAGCG
12
-
2
GCTTC
C9E72_RS22730
4354097
4355761
-
Genic
1222
NZ_CP028592.1
4354841
4354854
AGGGGC
13
-
2
CCCTGC
C9E72_RS22730
4354097
4355761
-
Genic
907
NZ_CP028592.1
4356518
4356530
CG
12
+
6
GC
mhpR
4355838
4356785
+
Genic
680
NZ_CP028592.1
4359266
4359279
ACGCAG
13
-
2
GCGTCT
C9E72_RS22750
4358686
4359768
+
Genic
580
NZ_CP028592.1
4359888
4359900
ACTATG
12
+
2
CTATGA
C9E72_RS22755
4359891
4362965
+
Genic
-3
NZ_CP028592.1
4360913
4360925
AGC
12
-
4
CTG
C9E72_RS22755
4359891
4362965
+
Genic
1022
NZ_CP028592.1
4362804
4362816
ATCGCC
12
+
2
GCCATC
C9E72_RS22755
4359891
4362965
+
Genic
2913
NZ_CP028592.1
4363058
4363071
AAAAAG
13
-
2
TTCTTT
lacY
4363017
4364270
+
Genic
41
NZ_CP028592.1
4364218
4364230
CCCCGG
12
+
2
CGGCCC
lacY
4363017
4364270
+
Genic
1201
NZ_CP028592.1
4365397
4365410
AGCGCC
13
+
2
CGCCAG
cynX
4365050
4366231
-
Genic
821
NZ_CP028592.1
4365901
4365913
ACCCC
12
+
2
CCCCA
cynX
4365050
4366231
-
Genic
318
NZ_CP028592.1
4366043
4366055
AGCGCC
12
+
2
GCCAGC
cynX
4365050
4366231
-
Genic
176
NZ_CP028592.1
4370473
4370486
AGCGCC
13
+
2
CCAGCG
codB
4369812
4371071
-
Genic
585
NZ_CP028592.1
4370642
4370654
ACCGTC
12
-
2
GACGGT
codB
4369812
4371071
-
Genic
417
NZ_CP028592.1
4372234
4372247
ACCGCC
13
+
2
CGCCAC
prpE
4371965
4373851
-
Genic
1604
NZ_CP028592.1
4373593
4373605
AAAGGT
12
+
2
AAAGGT
prpE
4371965
4373851
-
Genic
246
NZ_CP028592.1
4373638
4373651
AGCGCC
13
+
2
CAGCGC
prpE
4371965
4373851
-
Genic
200
NZ_CP028592.1
4375772
4375787
AAGCCG
15
-
2
TCGGCT
prpC
4375376
4376545
-
Genic
758
NZ_CP028592.1
4377344
4377356
AGCGGC
12
+
2
GCAGCG
prpB
4376701
4377591
-
Genic
235