Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2301 to 2325 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4427220
4427234
AACGTC
14
+
2
GTCAAC
C9E72_RS23035
4424787
4429040
-
Genic
1806
NZ_CP028592.1
4428439
4428451
AACACC
12
+
2
CACCAA
C9E72_RS23035
4424787
4429040
-
Genic
589
NZ_CP028592.1
4430878
4430891
AATGAT
13
+
2
TGATAA
C9E72_RS23050
4431018
4431944
-
Intergenic
1053
NZ_CP028592.1
4432439
4432451
ACCTCC
12
-
2
GGTGGA
C9E72_RS23055
4432101
4433021
+
Genic
338
NZ_CP028592.1
4435960
4435972
AAGACG
12
-
2
GTCTTC
C9E72_RS23070
4435210
4436748
-
Genic
776
NZ_CP028592.1
4436241
4436253
ACCTGC
12
-
2
AGGTGC
C9E72_RS23070
4435210
4436748
-
Genic
495
NZ_CP028592.1
4439669
4439681
AAATGG
12
+
2
GGAAAT
ecpR
4439275
4439817
+
Genic
394
NZ_CP028592.1
4443546
4443559
AACCCG
13
+
2
CCGAAC
ecpD
4443747
4445390
+
Intergenic
-188
NZ_CP028592.1
4443856
4443868
AAACAC
12
-
2
GTTTGT
ecpD
4443747
4445390
+
Genic
109
NZ_CP028592.1
4447041
4447053
AACCAG
12
+
2
ACCAGA
C9E72_RS23140
4446959
4447573
-
Genic
520
NZ_CP028592.1
4448831
4448845
AGCCCG
14
-
2
CGGGCT
C9E72_RS23150
4448677
4449633
+
Genic
154
NZ_CP028592.1
4449724
4449736
ACGGC
12
+
2
CGGCA
C9E72_RS23155
4449630
4451828
+
Genic
94
NZ_CP028592.1
4451168
4451180
ACCTCC
12
+
2
ACCTCC
C9E72_RS23155
4449630
4451828
+
Genic
1538
NZ_CP028592.1
4451522
4451534
ATGCCC
12
-
2
ATGGGC
C9E72_RS23155
4449630
4451828
+
Genic
1892
NZ_CP028592.1
4451988
4452001
CCGCG
13
-
2
GCGGC
paoD
4451838
4452794
+
Genic
150
NZ_CP028592.1
4452074
4452086
AGCGGC
12
-
2
GCCGCT
paoD
4451838
4452794
+
Genic
236
NZ_CP028592.1
4452487
4452499
ACCGAT
12
+
2
CGATAC
paoD
4451838
4452794
+
Genic
649
NZ_CP028592.1
4463683
4463695
ACAGGC
12
+
2
CAGGCA
C9E72_RS23210
4463428
4463751
-
Genic
56
NZ_CP028592.1
4465726
4465738
AACAG
12
+
2
CAGAA
C9E72_RS23230
4465717
4466469
+
Genic
9
NZ_CP028592.1
4470502
4470514
AAAATC
12
+
2
AAAATC
C9E72_RS23270
4469975
4470592
-
Genic
78
NZ_CP028592.1
4472034
4472046
AGCGAT
12
+
2
ATAGCG
C9E72_RS23280
4470985
4472166
-
Genic
120
NZ_CP028592.1
4473759
4473771
AGAGCT
12
+
2
CTAGAG
C9E72_RS23290
4473129
4473872
-
Genic
101
NZ_CP028592.1
4473906
4473918
ACATAT
12
-
2
GTATAT
C9E72_RS23290
4473129
4473872
-
Intergenic
-34
NZ_CP028592.1
4474012
4474024
AACTGT
12
-
2
GTTACA
C9E72_RS23290
4473129
4473872
-
Intergenic
-140
NZ_CP028592.1
4477581
4477593
AAATAT
12
-
2
ATTTAT
C9E72_RS23315
4477208
4477651
-
Genic
58