Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2326 to 2350 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4477953
4477965
ATCC
12
+
3
CATC
C9E72_RS23320
4477672
4478067
-
Genic
102
NZ_CP028592.1
4479294
4479306
AACGGG
12
-
2
GTTCCC
C9E72_RS23330
4478913
4479971
-
Genic
665
NZ_CP028592.1
4480958
4480970
AAAAAG
12
-
2
TTTTTC
C9E72_RS23345
4480931
4482010
-
Genic
1040
NZ_CP028592.1
4491476
4491488
ATCC
12
+
3
CATC
C9E72_RS23415
4491339
4492565
-
Genic
1077
NZ_CP028592.1
4492999
4493011
ACCATC
12
-
2
TGATGG
C9E72_RS23420
4492713
4494209
-
Genic
1198
NZ_CP028592.1
4497276
4497288
ACCCC
12
+
2
CCCCA
C9E72_RS23455
4497202
4497537
-
Genic
249
NZ_CP028592.1
4498129
4498141
AATGTG
12
+
2
GTGAAT
C9E72_RS23465
4498246
4498479
-
Intergenic
338
NZ_CP028592.1
4502493
4502505
ACGCC
12
+
2
GCCAC
C9E72_RS23495
4502355
4502681
-
Genic
176
NZ_CP028592.1
4505667
4505679
AACAGG
12
-
2
TCCTGT
C9E72_RS23525
4505652
4505912
-
Genic
233
NZ_CP028592.1
4506293
4506305
ACTGGC
12
-
2
CAGTGC
C9E72_RS23535
4506010
4506702
+
Genic
283
NZ_CP028592.1
4506500
4506513
ACCATC
13
-
2
TGATGG
C9E72_RS23535
4506010
4506702
+
Genic
490
NZ_CP028592.1
4513390
4513404
AAAATG
14
+
2
AATGAA
phoE
4513398
4514453
+
Genic
6
NZ_CP028592.1
4517880
4517893
AAAGAG
13
+
2
AGAGAA
pepD
4517006
4518463
+
Genic
874
NZ_CP028592.1
4519284
4519296
ACTGCG
12
+
2
ACTGCG
C9E72_RS23625
4518989
4519255
-
Intergenic
-29
NZ_CP028592.1
4519380
4519393
AAATAT
13
+
2
ATATAA
C9E72_RS23625
4518989
4519255
-
Intergenic
-125
NZ_CP028592.1
4521731
4521743
AATAGC
12
+
2
CAATAG
dinB
4520770
4521825
-
Genic
82
NZ_CP028592.1
4522373
4522386
AGATGG
13
-
2
ATCTCC
lafU
4521896
4522666
-
Genic
280
NZ_CP028592.1
4523254
4523266
AGGCGG
12
+
2
GGCGGA
flhA
4522626
4524365
+
Genic
628
NZ_CP028592.1
4523677
4523690
AAGGCG
13
+
2
GAAGGC
flhA
4522626
4524365
+
Genic
1051
NZ_CP028592.1
4524654
4524666
AAATAT
12
+
2
ATATAA
flhA
4522626
4524365
+
Intergenic
2028
NZ_CP028592.1
4526317
4526329
AATC
12
+
3
TCAA
dinJ
4526142
4526402
+
Genic
175
NZ_CP028592.1
4535084
4535096
AAAGC
12
-
2
TTGCT
C9E72_RS23725
4535058
4539281
-
Genic
4185
NZ_CP028592.1
4536190
4536202
ACAGCG
12
+
2
GCGACA
C9E72_RS23725
4535058
4539281
-
Genic
3079
NZ_CP028592.1
4536551
4536563
ATATCG
12
+
2
GATATC
C9E72_RS23725
4535058
4539281
-
Genic
2718
NZ_CP028592.1
4537590
4537602
ACTCAT
12
+
2
TCATAC
C9E72_RS23725
4535058
4539281
-
Genic
1679