Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2376 to 2400 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4603896
4603909
ACCGAT
13
-
2
GGTATC
bamA
4602670
4605102
-
Genic
1193
NZ_CP028592.1
4604447
4604460
AAACAG
13
-
2
GTTTCT
bamA
4602670
4605102
-
Genic
642
NZ_CP028592.1
4607477
4607489
AAAGT
12
+
2
GTAAA
ispU
4607366
4608124
-
Genic
635
NZ_CP028592.1
4608777
4608790
AGCGCC
13
-
2
GCTGGC
ispC
4608313
4609509
-
Genic
719
NZ_CP028592.1
4610008
4610020
ACGCCG
12
-
2
CGGCGT
C9E72_RS24070
4609601
4610158
-
Genic
138
NZ_CP028592.1
4610678
4610690
ACAGCT
12
-
2
AGCTGT
pyrH
4610308
4611033
-
Genic
343
NZ_CP028592.1
4615697
4615709
AGCGCC
12
+
2
GCGCCA
glnD
4614238
4616910
+
Genic
1459
NZ_CP028592.1
4619699
4619711
AGCC
12
+
3
GCCA
C9E72_RS24110
4618555
4619712
-
Genic
1
NZ_CP028592.1
4620496
4620508
ACCGAT
12
+
2
ACCGAT
degP
4619867
4621291
-
Genic
783
NZ_CP028592.1
4623774
4623787
CCGCG
13
+
2
CGCCG
btuF
4623713
4624513
+
Genic
61
NZ_CP028592.1
4625237
4625250
AACCGC
13
+
2
AACCGC
erpA
4625221
4625565
-
Genic
315
NZ_CP028592.1
4625828
4625840
AACCAG
12
+
2
CCAGAA
clcA
4625647
4627068
-
Genic
1228
NZ_CP028592.1
4629368
4629380
ACCGCC
12
+
2
CCGCCA
fhuB
4628608
4630590
-
Genic
1210
NZ_CP028592.1
4632336
4632348
AACCGC
12
-
2
GGTTGC
fhuA
4632325
4634568
-
Genic
2220
NZ_CP028592.1
4633316
4633330
ACGCAT
14
+
2
TACGCA
fhuA
4632325
4634568
-
Genic
1238
NZ_CP028592.1
4634622
4634634
AAGAT
12
+
2
AAGAT
fhuA
4632325
4634568
-
Intergenic
-54
NZ_CP028592.1
4636170
4636183
AACAGC
13
-
2
CTGTTG
mrcB
4634788
4637322
-
Genic
1139
NZ_CP028592.1
4637155
4637169
AAAGGC
14
-
2
CCTTTG
mrcB
4634788
4637322
-
Genic
153
NZ_CP028592.1
4637444
4637457
ACCCTC
13
-
2
AGGGTG
hrpB
4637518
4639947
-
Intergenic
2490
NZ_CP028592.1
4637495
4637508
AGAGGG
13
+
2
AGGGAG
hrpB
4637518
4639947
-
Intergenic
2439
NZ_CP028592.1
4638054
4638066
AAGCGG
12
-
2
TTCCGC
hrpB
4637518
4639947
-
Genic
1881
NZ_CP028592.1
4639536
4639548
AACGCC
12
+
2
CGCCAA
hrpB
4637518
4639947
-
Genic
399
NZ_CP028592.1
4640181
4640193
AAAGAG
12
+
2
AGAGAA
thpR
4640021
4640551
+
Genic
160
NZ_CP028592.1
4640276
4640288
ACACC
12
-
2
GTGTG
thpR
4640021
4640551
+
Genic
255
NZ_CP028592.1
4642268
4642280
ACCTGC
12
+
2
CTGCAC
gluQRS
4641940
4642866
+
Genic
328