Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2351 to 2375 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4538303
4538315
ACACGT
12
-
2
CGTGTA
C9E72_RS23725
4535058
4539281
-
Genic
966
NZ_CP028592.1
4548613
4548625
CCCG
12
-
3
GCGG
tagH
4548553
4549833
+
Genic
60
NZ_CP028592.1
4549994
4550006
AATACC
12
+
2
ACCAAT
tssJ
4549830
4550354
+
Genic
164
NZ_CP028592.1
4554029
4554063
ACTCTG
34
-
5
CAGAGT
tssH
4552463
4555246
+
Genic
1566
NZ_CP028592.1
4554455
4554467
AAACCG
12
+
2
AAACCG
tssH
4552463
4555246
+
Genic
1992
NZ_CP028592.1
4555353
4555365
ACGGCG
12
-
2
GTCGCC
tagO
4555243
4555986
+
Genic
110
NZ_CP028592.1
4561123
4561137
AGCGCC
14
-
2
CGCTGG
C9E72_RS23810
4560985
4562394
+
Genic
138
NZ_CP028592.1
4561191
4561204
ACACGG
13
+
2
CGGACA
C9E72_RS23810
4560985
4562394
+
Genic
206
NZ_CP028592.1
4561961
4561974
AACAGC
13
+
2
GCAACA
C9E72_RS23810
4560985
4562394
+
Genic
976
NZ_CP028592.1
4562207
4562219
AAGCAG
12
+
2
GCAGAA
C9E72_RS23810
4560985
4562394
+
Genic
1222
NZ_CP028592.1
4565108
4565120
AAAAAC
12
-
2
TTTGTT
C9E72_RS23835
4564205
4564501
+
Intergenic
903
NZ_CP028592.1
4567159
4567171
AAATC
12
+
2
ATCAA
rnhA
4566820
4567287
+
Genic
339
NZ_CP028592.1
4567168
4567180
AATGGG
12
+
2
AATGGG
rnhA
4566820
4567287
+
Genic
348
NZ_CP028592.1
4568202
4568214
ACGATC
12
+
2
ATCACG
gloB
4568040
4568795
+
Genic
162
NZ_CP028592.1
4569101
4569115
AAACAG
14
+
2
AACAGA
mltD
4568867
4570225
+
Genic
234
NZ_CP028592.1
4580715
4580727
AGCTCC
12
-
2
GCTGGA
metN
4580399
4581430
+
Genic
316
NZ_CP028592.1
4582121
4582133
AAATTC
12
+
2
TTCAAA
metQ
4582116
4582931
+
Genic
5
NZ_CP028592.1
4582164
4582176
ACTGGC
12
+
2
CACTGG
metQ
4582116
4582931
+
Genic
48
NZ_CP028592.1
4582550
4582563
AGC
13
-
4
CTG
metQ
4582116
4582931
+
Genic
434
NZ_CP028592.1
4583889
4583901
ACTGGC
12
-
2
TGCCAG
tsaA
4583450
4584157
+
Genic
439
NZ_CP028592.1
4589844
4589856
AGCGCC
12
+
2
GCGCCA
tilS
4589405
4590700
-
Genic
844
NZ_CP028592.1
4590121
4590133
AGGCGC
12
+
2
GCGCAG
tilS
4589405
4590700
-
Genic
567
NZ_CP028592.1
4599163
4599175
ATGCC
12
-
2
ATGGC
lpxB
4598535
4599683
-
Genic
508
NZ_CP028592.1
4599890
4599902
ACGCC
12
-
2
GGCGT
lpxA
4599683
4600471
-
Genic
569
NZ_CP028592.1
4602638
4602650
ACCACT
12
+
2
CACTAC
bamA
4602670
4605102
-
Intergenic
2452