Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2401 to 2425 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4644046
4644060
AACTGC
14
-
2
GCAGTT
pcnB
4642905
4644323
+
Genic
1141
NZ_CP028592.1
4644807
4644819
AAAAT
12
-
2
TTATT
folK
4644320
4644802
+
Intergenic
487
NZ_CP028592.1
4647206
4647219
AAATCG
13
-
2
CGATTT
C9E72_RS24230
4646533
4649133
+
Genic
673
NZ_CP028592.1
4648506
4648518
AGGCCG
12
-
2
TCGGCC
C9E72_RS24230
4646533
4649133
+
Genic
1973
NZ_CP028592.1
4649498
4649511
ATCCCC
13
-
2
TGGGGA
C9E72_RS24235
4649147
4649695
+
Genic
351
NZ_CP028592.1
4650563
4650575
AATGTG
12
+
2
AATGTG
C9E72_RS24245
4650336
4650926
+
Genic
227
NZ_CP028592.1
4652710
4652722
ACCAGC
12
-
2
TGCTGG
panB
4652182
4652976
+
Genic
528
NZ_CP028592.1
4653661
4653673
AATAGC
12
-
2
TATTGC
panC
4652988
4653839
+
Genic
673
NZ_CP028592.1
4654007
4654019
ACGCAG
12
+
2
ACGCAG
C9E72_RS24265
4654138
4655034
-
Intergenic
1015
NZ_CP028592.1
4654094
4654106
ATCGCC
12
-
2
ATGGCG
C9E72_RS24265
4654138
4655034
-
Intergenic
928
NZ_CP028592.1
4655640
4655652
AAATG
12
+
2
AATGA
panD
4655308
4655688
+
Genic
332
NZ_CP028592.1
4657542
4657554
ACGTCC
12
+
2
CCACGT
C9E72_RS24285
4657530
4658300
-
Genic
746
NZ_CP028592.1
4660424
4660436
AAACAT
12
+
2
CATAAA
C9E72_RS24300
4660035
4660571
-
Genic
135
NZ_CP028592.1
4661958
4661971
AAAGGT
13
-
2
ACCTTT
C9E72_RS24305
4660777
4663167
+
Genic
1181
NZ_CP028592.1
4664107
4664119
AAGGTG
12
-
2
TTCACC
cueO
4663369
4664919
-
Genic
800
NZ_CP028592.1
4665354
4665366
AATGCC
12
-
2
GGCATT
C9E72_RS24315
4665085
4665432
+
Genic
269
NZ_CP028592.1
4665871
4665883
ACACG
12
-
2
GTGTC
speE
4665538
4666404
+
Genic
333
NZ_CP028592.1
4666425
4666437
AAACTG
12
+
2
AAACTG
speD
4666420
4667214
+
Genic
5
NZ_CP028592.1
4669974
4669986
AAAGCG
12
-
2
GCTTTC
acnB
4667790
4670387
-
Genic
401
NZ_CP028592.1
4671668
4671680
ATC
12
+
4
CAT
C9E72_RS24340
4670742
4672595
+
Genic
926
NZ_CP028592.1
4673755
4673767
AAAGTC
12
-
2
ACTTTG
lpdA
4672666
4674090
-
Genic
323
NZ_CP028592.1
4676872
4676885
AAGCGT
13
+
2
CGTAAG
aceE
4676205
4678868
-
Genic
1983
NZ_CP028592.1
4678273
4678285
ACCCAG
12
+
2
GACCCA
aceE
4676205
4678868
-
Genic
583
NZ_CP028592.1
4678630
4678643
AACTGG
13
-
2
GTTCCA
aceE
4676205
4678868
-
Genic
225
NZ_CP028592.1
4679124
4679136
ATCGC
12
-
2
GCGAT
pdhR
4679029
4679793
-
Genic
657