Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2276 to 2300 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4382113
4382126
AAAAAT
13
+
2
AAATAA
C9E72_RS22840
4381285
4382100
-
Intergenic
-13
NZ_CP028592.1
4382868
4382880
CCCGG
12
+
2
CCCGG
yahK
4382343
4383392
-
Genic
512
NZ_CP028592.1
4383289
4383301
AAATCG
12
-
2
CGATTT
yahK
4382343
4383392
-
Genic
91
NZ_CP028592.1
4388280
4388294
AAGGTG
14
-
2
TCACCT
C9E72_RS22870
4388166
4388576
-
Genic
282
NZ_CP028592.1
4391129
4391141
AGGCGG
12
-
2
CCGCCT
C9E72_RS22880
4390267
4391217
-
Genic
76
NZ_CP028592.1
4393331
4393343
AAAGCG
12
-
2
TCGCTT
fdrA
4393150
4394697
-
Genic
1354
NZ_CP028592.1
4393911
4393925
AGGCGC
14
+
2
CGCAGG
fdrA
4393150
4394697
-
Genic
772
NZ_CP028592.1
4394093
4394105
ACCGGC
12
-
2
TGCCGG
fdrA
4393150
4394697
-
Genic
592
NZ_CP028592.1
4394579
4394591
ATCGCC
12
+
2
TCGCCA
fdrA
4393150
4394697
-
Genic
106
NZ_CP028592.1
4395375
4395387
ACTC
12
-
3
AGTG
C9E72_RS22900
4394687
4395550
-
Genic
163
NZ_CP028592.1
4395523
4395536
ATCCGC
13
+
2
ATCCGC
C9E72_RS22900
4394687
4395550
-
Genic
14
NZ_CP028592.1
4398826
4398838
AAAAAT
12
-
2
TTATTT
C9E72_RS22920
4398025
4399113
-
Genic
275
NZ_CP028592.1
4401107
4401119
AACGAT
12
-
2
CGTTAT
C9E72_RS22925
4399255
4403238
-
Genic
2119
NZ_CP028592.1
4404151
4404163
AACCGC
12
+
2
CGCAAC
betT
4403812
4405845
-
Genic
1682
NZ_CP028592.1
4405037
4405050
AGCGCC
13
+
2
CCAGCG
betT
4403812
4405845
-
Genic
795
NZ_CP028592.1
4407369
4407382
AGATCG
13
-
2
GATCTC
betB
4406575
4408047
+
Genic
794
NZ_CP028592.1
4410226
4410238
AAAAAT
12
+
2
AAAAAT
betA
4408061
4409749
+
Intergenic
2165
NZ_CP028592.1
4411439
4411451
AATTC
12
+
2
ATTCA
C9E72_RS22960
4411910
4412494
+
Intergenic
-459
NZ_CP028592.1
4413395
4413408
AAATAT
13
+
2
ATAAAT
C9E72_RS22965
4412648
4413409
+
Genic
747
NZ_CP028592.1
4413413
4413425
AAATTG
12
+
2
GAAATT
C9E72_RS22965
4412648
4413409
+
Intergenic
765
NZ_CP028592.1
4414235
4414247
AAATTT
12
+
2
AAATTT
C9E72_RS22970
4413451
4414545
+
Genic
784
NZ_CP028592.1
4414931
4414943
AAAAT
12
-
2
ATTTT
C9E72_RS22980
4414893
4415309
+
Genic
38
NZ_CP028592.1
4419101
4419114
AAATAG
13
+
2
GAAATA
C9E72_RS23005
4419176
4420030
-
Intergenic
916
NZ_CP028592.1
4420137
4420150
AAAAAG
13
+
2
AAGAAA
C9E72_RS23010
4420256
4421581
+
Intergenic
-106
NZ_CP028592.1
4420945
4420959
AAGTGC
14
+
2
CAAGTG
C9E72_RS23010
4420256
4421581
+
Genic
689