Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2876 to 2900 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1887353
1887366
CCGCG
13
-
2
GCGGC
UKMR15_RS08305
1887308
1888915
+
Genic
-45
NZ_LR595896.1
1888284
1888296
AGCGCG
12
-
2
CGCGCT
UKMR15_RS08305
1887308
1888915
+
Genic
-976
NZ_LR595896.1
1888328
1888340
ACGCGC
12
-
2
TGCGCG
UKMR15_RS08305
1887308
1888915
+
Genic
-1020
NZ_LR595896.1
1889997
1890009
CCGCG
12
-
2
CGCGG
UKMR15_RS08315
1890129
1891220
+
Intergenic
120
NZ_LR595896.1
1890697
1890710
CCCGCG
13
-
2
CGCGGG
UKMR15_RS08315
1890129
1891220
+
Genic
-568
NZ_LR595896.1
1890762
1890774
ACG
12
-
4
TCG
UKMR15_RS08315
1890129
1891220
+
Genic
-633
NZ_LR595896.1
1891605
1891617
ACGTCG
12
+
2
ACGTCG
UKMR15_RS08320
1891251
1892792
+
Genic
-354
NZ_LR595896.1
1892264
1892277
CCG
13
+
4
GCC
UKMR15_RS08320
1891251
1892792
+
Genic
-1013
NZ_LR595896.1
1892469
1892481
CG
12
+
6
GC
UKMR15_RS08320
1891251
1892792
+
Genic
-1218
NZ_LR595896.1
1892651
1892663
CCGCG
12
-
2
GCGCG
UKMR15_RS08320
1891251
1892792
+
Genic
-1400
NZ_LR595896.1
1892876
1892888
CCG
12
-
4
GCG
UKMR15_RS08325
1892789
1893535
+
Genic
-87
NZ_LR595896.1
1892958
1892970
AGCTCG
12
+
2
GCTCGA
UKMR15_RS08325
1892789
1893535
+
Genic
-169
NZ_LR595896.1
1893172
1893186
CCCCG
14
-
2
GCGGG
UKMR15_RS08325
1892789
1893535
+
Genic
-383
NZ_LR595896.1
1893341
1893353
ACGCTC
12
+
2
TCACGC
UKMR15_RS08325
1892789
1893535
+
Genic
-552
NZ_LR595896.1
1893455
1893467
AACAGG
12
-
2
TCCTGT
UKMR15_RS08325
1892789
1893535
+
Genic
-666
NZ_LR595896.1
1893727
1893739
CCCGCG
12
-
2
GCGCGG
UKMR15_RS08330
1893851
1894354
-
Intergenic
112
NZ_LR595896.1
1894011
1894023
ACGGC
12
+
2
GCACG
UKMR15_RS08330
1893851
1894354
-
Genic
-160
NZ_LR595896.1
1894208
1894222
CCGGCG
14
+
2
GCGCCG
UKMR15_RS08330
1893851
1894354
-
Genic
-357
NZ_LR595896.1
1894401
1894415
CCGGCG
14
+
2
GGCGCC
UKMR15_RS08330
1893851
1894354
-
Intergenic
-550
NZ_LR595896.1
1894619
1894631
CCGGCG
12
+
2
GCCGGC
UKMR15_RS08335
1894600
1895313
+
Genic
-19
NZ_LR595896.1
1894973
1894985
ACGAGG
12
+
2
GGACGA
UKMR15_RS08335
1894600
1895313
+
Genic
-373
NZ_LR595896.1
1895400
1895414
ACGCCG
14
+
2
CGCCGA
UKMR15_RS08340
1895369
1895611
+
Genic
-31
NZ_LR595896.1
1895860
1895873
ACGCG
13
-
2
TCGCG
UKMR15_RS08345
1895670
1896686
+
Genic
-190
NZ_LR595896.1
1896288
1896300
ACGGCG
12
+
2
GCGACG
UKMR15_RS08345
1895670
1896686
+
Genic
-618
NZ_LR595896.1
1896480
1896492
ACGGCG
12
+
2
ACGGCG
UKMR15_RS08345
1895670
1896686
+
Genic
-810