Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6051 to 6075 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
182888
182900
AGCCCC
12
+
2
CCAGCC
UKMR15_RS18495
182208
183242
-
Genic
-680
NZ_LR595897.1
183077
183089
AAGCCG
12
+
2
GAAGCC
UKMR15_RS18495
182208
183242
-
Genic
-869
NZ_LR595897.1
183099
183111
ACGAGC
12
+
2
AGCACG
UKMR15_RS18495
182208
183242
-
Genic
-891
NZ_LR595897.1
183449
183462
ACGATC
13
+
2
GATCAC
UKMR15_RS18500
183285
184838
-
Genic
-164
NZ_LR595897.1
183459
183471
ACGCCG
12
+
2
ACGCCG
UKMR15_RS18500
183285
184838
-
Genic
-174
NZ_LR595897.1
183624
183636
AACGTG
12
-
2
ACGTTC
UKMR15_RS18500
183285
184838
-
Genic
-339
NZ_LR595897.1
183740
183752
AACATC
12
-
2
GATGTT
UKMR15_RS18500
183285
184838
-
Genic
-455
NZ_LR595897.1
185612
185625
ACGCCG
13
+
2
CGACGC
UKMR15_RS18505
184825
186075
-
Genic
-787
NZ_LR595897.1
186551
186563
CCGGCG
12
+
2
CGGCGC
UKMR15_RS18510
186617
186967
-
Intergenic
54
NZ_LR595897.1
186794
186807
CCCGCG
13
-
2
GCGGGC
UKMR15_RS18510
186617
186967
-
Genic
-177
NZ_LR595897.1
187286
187298
CCGCG
12
-
2
GCGGC
UKMR15_RS18515
186979
189627
-
Genic
-307
NZ_LR595897.1
187931
187944
ACCGGC
13
-
2
CGGTGC
UKMR15_RS18515
186979
189627
-
Genic
-952
NZ_LR595897.1
190110
190124
ACCCC
14
-
2
GGGGT
dbpA
190297
191694
-
Intergenic
173
NZ_LR595897.1
190229
190242
CCGG
13
+
3
CGGC
dbpA
190297
191694
-
Intergenic
55
NZ_LR595897.1
190837
190850
AGCGCG
13
-
2
TCGCGC
dbpA
190297
191694
-
Genic
-540
NZ_LR595897.1
190867
190879
AGCGCG
12
+
2
AGCGCG
dbpA
190297
191694
-
Genic
-570
NZ_LR595897.1
191649
191661
AGCGCC
12
+
2
CAGCGC
dbpA
190297
191694
-
Genic
-1352
NZ_LR595897.1
192546
192558
ACGCCG
12
+
2
CGACGC
UKMR15_RS18530
192392
193705
-
Genic
-154
NZ_LR595897.1
192992
193004
AGCGGC
12
+
2
AGCGGC
UKMR15_RS18530
192392
193705
-
Genic
-600
NZ_LR595897.1
193019
193032
CCCGCG
13
-
2
GGCGCG
UKMR15_RS18530
192392
193705
-
Genic
-627
NZ_LR595897.1
193225
193238
CCGCG
13
+
2
GCCGC
UKMR15_RS18530
192392
193705
-
Genic
-833
NZ_LR595897.1
195989
196001
CCGCG
12
-
2
CGCGG
UKMR15_RS18540
195115
196017
+
Genic
-874
NZ_LR595897.1
199772
199800
AAGCCG
28
+
4
GCCGAA
UKMR15_RS18560
199431
199970
-
Genic
-341
NZ_LR595897.1
200177
200189
AGGCCG
12
-
2
GCCTCG
UKMR15_RS18565
200060
200959
-
Genic
-117
NZ_LR595897.1
200322
200335
AAGGCG
13
-
2
CCTTCG
UKMR15_RS18565
200060
200959
-
Genic
-262