Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6151 to 6175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
259448
259460
ACGGCG
12
+
2
CGGCGA
UKMR15_RS18785
258475
259830
-
Genic
-973
NZ_LR595897.1
259523
259535
CCGGCG
12
+
2
CGGCGC
UKMR15_RS18785
258475
259830
-
Genic
-1048
NZ_LR595897.1
259670
259682
AGCGCG
12
+
2
CGAGCG
UKMR15_RS18785
258475
259830
-
Genic
-1195
NZ_LR595897.1
260148
260161
ACCTGG
13
-
2
CAGGTC
UKMR15_RS18790
260017
261021
-
Genic
-131
NZ_LR595897.1
260315
260328
AGCGCG
13
-
2
GCTCGC
UKMR15_RS18790
260017
261021
-
Genic
-298
NZ_LR595897.1
260350
260363
ACCGCT
13
-
2
CGGTAG
UKMR15_RS18790
260017
261021
-
Genic
-333
NZ_LR595897.1
260651
260663
ACCGCG
12
+
2
CCGCGA
UKMR15_RS18790
260017
261021
-
Genic
-634
NZ_LR595897.1
261081
261093
AACCG
12
+
2
CGAAC
UKMR15_RS18795
261011
261886
-
Genic
-70
NZ_LR595897.1
261386
261398
AGCGCG
12
-
2
CGCTCG
UKMR15_RS18795
261011
261886
-
Genic
-375
NZ_LR595897.1
262088
262100
CCGG
12
+
3
CGGC
UKMR15_RS18800
261883
263328
-
Genic
-205
NZ_LR595897.1
262663
262675
CG
12
+
6
CG
UKMR15_RS18800
261883
263328
-
Genic
-780
NZ_LR595897.1
263681
263698
AGCGCG
17
+
2
GCGCGA
UKMR15_RS18810
263590
264390
-
Genic
-91
NZ_LR595897.1
263726
263738
AAATCG
12
+
2
AATCGA
UKMR15_RS18810
263590
264390
-
Genic
-136
NZ_LR595897.1
263734
263748
ACATCG
14
-
2
TCGATG
UKMR15_RS18810
263590
264390
-
Genic
-144
NZ_LR595897.1
264934
264948
AGCGCG
14
-
2
CGCTCG
UKMR15_RS18815
264658
265572
+
Genic
-276
NZ_LR595897.1
265634
265648
ACGCCG
14
-
2
CGGCGT
UKMR15_RS18815
264658
265572
+
Intergenic
-976
NZ_LR595897.1
266207
266240
ACGCAG
33
+
5
CGCAGA
UKMR15_RS18820
266024
266335
-
Genic
-183
NZ_LR595897.1
266244
266276
ACATGC
32
+
5
GCACAT
UKMR15_RS18820
266024
266335
-
Genic
-220
NZ_LR595897.1
266688
266700
CCGCG
12
-
2
GCGCG
UKMR15_RS18825
266334
268847
+
Genic
-354
NZ_LR595897.1
266931
266943
AGCGCG
12
-
2
TCGCGC
UKMR15_RS18825
266334
268847
+
Genic
-597
NZ_LR595897.1
267456
267468
ACACGT
12
-
2
TGTACG
UKMR15_RS18825
266334
268847
+
Genic
-1122
NZ_LR595897.1
267855
267867
ACCGGC
12
-
2
TGCCGG
UKMR15_RS18825
266334
268847
+
Genic
-1521
NZ_LR595897.1
268981
268993
CCGCG
12
+
2
CGCCG
UKMR15_RS18825
266334
268847
+
Intergenic
-2647
NZ_LR595897.1
269562
269577
AGCGCG
15
-
2
CGCGCT
pip
269234
270172
+
Genic
-328
NZ_LR595897.1
270552
270566
ACGCCG
14
-
2
CGTCGG
UKMR15_RS18835
270395
271219
+
Genic
-157