Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6251 to 6275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
310144
310156
CCG
12
-
4
CGG
UKMR15_RS18975
307465
311418
+
Genic
-2679
NZ_LR595897.1
310365
310378
CCCGCG
13
+
2
GCGCCC
UKMR15_RS18975
307465
311418
+
Genic
-2900
NZ_LR595897.1
310411
310423
ACGATC
12
+
2
CGATCA
UKMR15_RS18975
307465
311418
+
Genic
-2946
NZ_LR595897.1
310466
310479
ACCGCG
13
+
2
GACCGC
UKMR15_RS18975
307465
311418
+
Genic
-3001
NZ_LR595897.1
310850
310862
ACGGCG
12
+
2
CGGCGA
UKMR15_RS18975
307465
311418
+
Genic
-3385
NZ_LR595897.1
311423
311435
CCGCG
12
+
2
CGCGC
UKMR15_RS18975
307465
311418
+
Intergenic
-3958
NZ_LR595897.1
312100
312113
CCGGCG
13
+
2
CCGGCG
UKMR15_RS18985
312132
313793
-
Intergenic
19
NZ_LR595897.1
315176
315188
ATCGCC
12
+
2
CATCGC
UKMR15_RS18995
314901
315194
-
Genic
-275
NZ_LR595897.1
316224
316236
ATCGCG
12
+
2
CGATCG
UKMR15_RS19000
315375
316424
+
Genic
-849
NZ_LR595897.1
316998
317012
AGCTCC
14
+
2
CAGCTC
UKMR15_RS19010
316648
317043
-
Genic
-350
NZ_LR595897.1
317209
317221
CCGCG
12
+
2
GCGCC
UKMR15_RS19015
317277
317471
+
Intergenic
56
NZ_LR595897.1
318083
318095
CCGCG
12
-
2
CGCGG
cydB
317954
318961
-
Genic
-129
NZ_LR595897.1
318171
318192
AGCGCG
21
+
3
CGAGCG
cydB
317954
318961
-
Genic
-217
NZ_LR595897.1
318870
318883
ATCGGC
13
-
2
CGATGC
cydB
317954
318961
-
Genic
-916
NZ_LR595897.1
319715
319727
ACGAGC
12
+
2
CGAGCA
UKMR15_RS19030
318997
320409
-
Genic
-718
NZ_LR595897.1
320677
320698
CCCGCG
21
-
3
GCGGGC
UKMR15_RS19030
318997
320409
-
Intergenic
-1680
NZ_LR595897.1
320875
320887
CCCGCG
12
+
2
CGCGCC
ltaE
321011
322024
+
Intergenic
124
NZ_LR595897.1
321304
321316
AGCCGC
12
+
2
CAGCCG
ltaE
321011
322024
+
Genic
-293
NZ_LR595897.1
321467
321479
AGCGCG
12
-
2
TCGCGC
ltaE
321011
322024
+
Genic
-456
NZ_LR595897.1
322047
322059
CCCG
12
+
3
CGCC
argP
321993
322970
-
Genic
-54
NZ_LR595897.1
322072
322084
CCG
12
-
4
GCG
argP
321993
322970
-
Genic
-79
NZ_LR595897.1
322581
322594
AGGATC
13
-
2
TGATCC
argP
321993
322970
-
Genic
-588
NZ_LR595897.1
322924
322938
ACGGCG
14
+
2
CGGCGA
argP
321993
322970
-
Genic
-931
NZ_LR595897.1
323043
323056
ACCGAT
13
-
2
GTATCG
argP
321993
322970
-
Intergenic
-1050
NZ_LR595897.1
323351
323363
AGCGGC
12
-
2
CGCTGC
argP
321993
322970
-
Intergenic
-1358