Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6326 to 6350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
348088
348100
CCCCGG
12
-
2
CGGGGC
UKMR15_RS19155
347899
348903
+
Genic
-189
NZ_LR595897.1
349015
349027
ACGGCG
12
+
2
CGGCGA
dhaL
348900
349559
+
Genic
-115
NZ_LR595897.1
349731
349745
CCG
14
+
4
GCC
dhaL
348900
349559
+
Intergenic
-831
NZ_LR595897.1
350215
350227
ACG
12
+
4
CGA
UKMR15_RS19170
350061
350444
-
Genic
-154
NZ_LR595897.1
350280
350292
CCG
12
-
4
GCG
UKMR15_RS19170
350061
350444
-
Genic
-219
NZ_LR595897.1
353300
353312
AAGCTG
12
+
2
TGAAGC
UKMR15_RS19185
352847
353656
+
Genic
-453
NZ_LR595897.1
353487
353501
ATCGCG
14
+
2
CGCGAT
UKMR15_RS19185
352847
353656
+
Genic
-640
NZ_LR595897.1
353546
353560
AAGGAC
14
+
2
AGGACA
UKMR15_RS19185
352847
353656
+
Genic
-699
NZ_LR595897.1
353866
353878
CCGCGG
12
+
2
CGCGGC
UKMR15_RS19185
352847
353656
+
Intergenic
-1019
NZ_LR595897.1
355486
355498
AGCCGC
12
-
2
GCGGCT
UKMR15_RS19190
354129
355244
-
Intergenic
-1357
NZ_LR595897.1
356048
356061
CCCG
13
-
3
GGCG
UKMR15_RS19190
354129
355244
-
Intergenic
-1919
NZ_LR595897.1
356719
356731
AGCCGC
12
+
2
CGCAGC
UKMR15_RS19200
357646
357924
+
Intergenic
915
NZ_LR595897.1
357269
357282
CCGCG
13
-
2
GCGGC
UKMR15_RS19200
357646
357924
+
Intergenic
364
NZ_LR595897.1
357477
357490
AGCGGC
13
-
2
CCGCTG
UKMR15_RS19200
357646
357924
+
Intergenic
156
NZ_LR595897.1
357940
357952
AAGCG
12
+
2
GCGAA
UKMR15_RS19200
357646
357924
+
Intergenic
-294
NZ_LR595897.1
358032
358046
AAGTCG
14
+
2
GTCGAA
UKMR15_RS19205
358018
358800
-
Genic
-14
NZ_LR595897.1
358515
358528
ACATCG
13
+
2
CATCGA
UKMR15_RS19205
358018
358800
-
Genic
-497
NZ_LR595897.1
359284
359298
AGCGGC
14
+
2
GCGGCA
UKMR15_RS19210
359034
359933
-
Genic
-250
NZ_LR595897.1
360917
360929
AGGCGC
12
+
2
CAGGCG
UKMR15_RS19215
360069
361256
+
Genic
-848
NZ_LR595897.1
360939
360951
AGCGCG
12
+
2
GCGCGA
UKMR15_RS19215
360069
361256
+
Genic
-870
NZ_LR595897.1
361866
361878
AGCGCG
12
-
2
TCGCGC
UKMR15_RS19220
361509
362846
+
Genic
-357
NZ_LR595897.1
362046
362058
CCGCG
12
-
2
GCGGC
UKMR15_RS19220
361509
362846
+
Genic
-537
NZ_LR595897.1
362883
362896
CCGCG
13
-
2
CGCGG
UKMR15_RS19220
361509
362846
+
Intergenic
-1374
NZ_LR595897.1
363305
363318
AAAGCC
13
+
2
CCAAAG
UKMR15_RS19225
363545
364264
-
Intergenic
227
NZ_LR595897.1
363364
363379
AACCCG
15
+
2
CCCGAA
UKMR15_RS19225
363545
364264
-
Intergenic
166