Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6751 to 6775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
627865
627880
CG
15
+
7
GC
UKMR15_RS20270
626962
627942
-
Genic
-903
NZ_LR595897.1
628160
628173
ACGCGC
13
+
2
CACGCG
potA
627939
629093
-
Genic
-221
NZ_LR595897.1
628495
628507
AGCTCG
12
+
2
CGAGCT
potA
627939
629093
-
Genic
-556
NZ_LR595897.1
628588
628600
AGCGCG
12
+
2
GCGCGA
potA
627939
629093
-
Genic
-649
NZ_LR595897.1
629210
629223
CCGGCG
13
+
2
GCGCCG
UKMR15_RS20280
629283
630404
-
Intergenic
60
NZ_LR595897.1
630021
630033
ACGCCG
12
-
2
TCGGCG
UKMR15_RS20280
629283
630404
-
Genic
-738
NZ_LR595897.1
631835
631847
CCCGCG
12
-
2
GCGCGG
UKMR15_RS20285
630472
631890
-
Genic
-1363
NZ_LR595897.1
633564
633576
CCGCG
12
+
2
GCGCC
UKMR15_RS20295
633287
634087
-
Genic
-277
NZ_LR595897.1
633794
633806
AGCGCC
12
+
2
AGCGCC
UKMR15_RS20295
633287
634087
-
Genic
-507
NZ_LR595897.1
634283
634296
CCGCG
13
-
2
GCGCG
UKMR15_RS20295
633287
634087
-
Intergenic
-996
NZ_LR595897.1
634760
634772
ACGATG
12
+
2
ATGACG
UKMR15_RS20300
635029
635580
+
Intergenic
257
NZ_LR595897.1
635254
635266
CCGCG
12
-
2
CGCGG
UKMR15_RS20300
635029
635580
+
Genic
-225
NZ_LR595897.1
635608
635620
CG
12
+
6
CG
UKMR15_RS20300
635029
635580
+
Intergenic
-579
NZ_LR595897.1
637326
637338
ACGGCG
12
+
2
ACGGCG
speB
637311
638273
+
Genic
-15
NZ_LR595897.1
638008
638020
CCGG
12
+
3
CGGC
speB
637311
638273
+
Genic
-697
NZ_LR595897.1
638064
638078
ACGGGC
14
+
2
CGGGCA
speB
637311
638273
+
Genic
-753
NZ_LR595897.1
639522
639534
ACCGCG
12
+
2
CGACCG
groL
639255
640901
+
Genic
-267
NZ_LR595897.1
640863
640881
CCCGCG
18
-
3
CGGGCG
groL
639255
640901
+
Genic
-1608
NZ_LR595897.1
640933
640945
CCCGCG
12
+
2
CCGCGC
UKMR15_RS20330
640962
641408
-
Intergenic
17
NZ_LR595897.1
641345
641361
ATCGCG
16
+
2
GATCGC
UKMR15_RS20330
640962
641408
-
Genic
-383
NZ_LR595897.1
641421
641433
CCGGCG
12
+
2
GCCGGC
UKMR15_RS20330
640962
641408
-
Intergenic
-459
NZ_LR595897.1
642515
642530
CCGCG
15
-
3
GCGCG
UKMR15_RS20335
642015
644549
+
Genic
-500
NZ_LR595897.1
642766
642779
CG
13
+
6
GC
UKMR15_RS20335
642015
644549
+
Genic
-751
NZ_LR595897.1
643030
643044
ACGCGC
14
+
2
GCGCAC
UKMR15_RS20335
642015
644549
+
Genic
-1015
NZ_LR595897.1
643127
643139
ATCGGC
12
+
2
ATCGGC
UKMR15_RS20335
642015
644549
+
Genic
-1112