Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9401 to 9425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2279871
2279883
CCGGCG
12
+
2
GCGCCG
UKMR15_RS26690
2279125
2280297
+
Genic
-746
NZ_LR595897.1
2281402
2281414
ACGTCC
12
+
2
CCACGT
UKMR15_RS26695
2280411
2282873
-
Genic
-991
NZ_LR595897.1
2281584
2281598
CCGG
14
+
3
CGGC
UKMR15_RS26695
2280411
2282873
-
Genic
-1173
NZ_LR595897.1
2282173
2282187
ACGTCG
14
+
2
CGTCGA
UKMR15_RS26695
2280411
2282873
-
Genic
-1762
NZ_LR595897.1
2282960
2282972
AGCGCG
12
+
2
AGCGCG
UKMR15_RS26700
2282870
2284336
-
Genic
-90
NZ_LR595897.1
2283392
2283405
ATCGCG
13
+
2
GCGATC
UKMR15_RS26700
2282870
2284336
-
Genic
-522
NZ_LR595897.1
2283937
2283950
AGCGCG
13
+
2
CGCGAG
UKMR15_RS26700
2282870
2284336
-
Genic
-1067
NZ_LR595897.1
2284981
2284993
AGCCCC
12
+
2
CCAGCC
UKMR15_RS26705
2284385
2286541
-
Genic
-596
NZ_LR595897.1
2285047
2285059
AACGGC
12
-
2
GCCGTT
UKMR15_RS26705
2284385
2286541
-
Genic
-662
NZ_LR595897.1
2285571
2285584
ACGCCG
13
+
2
CGACGC
UKMR15_RS26705
2284385
2286541
-
Genic
-1186
NZ_LR595897.1
2286442
2286455
AGCCAT
13
+
2
GCCATA
UKMR15_RS26705
2284385
2286541
-
Genic
-2057
NZ_LR595897.1
2286663
2286676
AAACGC
13
+
2
ACGCAA
UKMR15_RS26710
2286719
2287030
-
Intergenic
43
NZ_LR595897.1
2287921
2287933
CCCGCG
12
-
2
GCGCGG
gmd
2288218
2289261
+
Intergenic
285
NZ_LR595897.1
2288093
2288105
AGCGCG
12
+
2
GCGAGC
gmd
2288218
2289261
+
Intergenic
113
NZ_LR595897.1
2289401
2289414
AGCGCC
13
-
2
GGCGCT
UKMR15_RS26725
2289248
2290216
+
Genic
-153
NZ_LR595897.1
2290422
2290434
ACGAGG
12
-
2
CTCGTC
UKMR15_RS26730
2290201
2290581
-
Genic
-221
NZ_LR595897.1
2293842
2293855
AGC
13
+
4
GCA
purF
2292380
2293915
-
Genic
-1462
NZ_LR595897.1
2294250
2294263
AACGCG
13
+
2
AACGCG
UKMR15_RS26745
2293968
2294462
-
Genic
-282
NZ_LR595897.1
2294724
2294737
ACCGCG
13
-
2
GTCGCG
UKMR15_RS26750
2294469
2295194
-
Genic
-255
NZ_LR595897.1
2295525
2295537
AGCGGC
12
+
2
GCGGCA
folC
2295314
2296627
-
Genic
-211
NZ_LR595897.1
2295762
2295774
AGCCCG
12
+
2
CGAGCC
folC
2295314
2296627
-
Genic
-448
NZ_LR595897.1
2298152
2298164
CCGCGG
12
+
2
CGCGGC
UKMR15_RS26765
2297691
2298506
-
Genic
-461
NZ_LR595897.1
2298415
2298428
ACCCGG
13
-
2
CCGGGT
UKMR15_RS26765
2297691
2298506
-
Genic
-724
NZ_LR595897.1
2298537
2298550
CCGCG
13
+
2
CGCGC
UKMR15_RS26770
2298551
2299399
-
Intergenic
1
NZ_LR595897.1
2298582
2298595
ACGCG
13
+
2
GCGAC
UKMR15_RS26770
2298551
2299399
-
Genic
-31