Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1026 to 1050 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
642298
642310
CCG
12
-
4
GCG
UKMR15_RS02885
641440
642333
+
Genic
-858
NZ_LR595896.1
643233
643246
ACATCG
13
+
2
CGACAT
UKMR15_RS02890
642335
643816
+
Genic
-898
NZ_LR595896.1
643243
643255
ACGATC
12
+
2
ATCACG
UKMR15_RS02890
642335
643816
+
Genic
-908
NZ_LR595896.1
643582
643595
CCGCG
13
-
2
GCGCG
UKMR15_RS02890
642335
643816
+
Genic
-1247
NZ_LR595896.1
643917
643929
AAACG
12
+
2
AAACG
UKMR15_RS02895
643941
644327
+
Intergenic
12
NZ_LR595896.1
644236
644249
CCCG
13
+
3
CCCG
UKMR15_RS02895
643941
644327
+
Genic
-295
NZ_LR595896.1
644283
644296
ACCTCG
13
-
2
AGGTCG
UKMR15_RS02895
643941
644327
+
Genic
-342
NZ_LR595896.1
645286
645299
ATCGCG
13
+
2
TCGCGA
queF
644667
645491
-
Genic
-619
NZ_LR595896.1
645377
645389
ATCGGC
12
-
2
GCCGAT
queF
644667
645491
-
Genic
-710
NZ_LR595896.1
646480
646492
CCG
12
+
4
CCG
ilvA
645511
647034
-
Genic
-969
NZ_LR595896.1
647098
647110
AGGCCG
12
-
2
TCGGCC
UKMR15_RS02910
647023
647172
+
Genic
-75
NZ_LR595896.1
647945
647957
CCGCGG
12
+
2
GCCGCG
UKMR15_RS02920
647541
651569
+
Genic
-404
NZ_LR595896.1
648639
648651
CG
12
+
6
GC
UKMR15_RS02920
647541
651569
+
Genic
-1098
NZ_LR595896.1
650481
650493
AAGCCC
12
-
2
TGGGCT
UKMR15_RS02920
647541
651569
+
Genic
-2940
NZ_LR595896.1
651680
651692
ACCGAG
12
+
2
GACCGA
UKMR15_RS02925
651604
652047
+
Genic
-76
NZ_LR595896.1
651959
651971
AGCCGC
12
-
2
GCTGCG
UKMR15_RS02925
651604
652047
+
Genic
-355
NZ_LR595896.1
653436
653449
ACTGCG
13
-
2
CAGTCG
UKMR15_RS02940
653278
654297
+
Genic
-158
NZ_LR595896.1
653883
653896
CCCGCG
13
-
2
GGCGCG
UKMR15_RS02940
653278
654297
+
Genic
-605
NZ_LR595896.1
654078
654090
CCCGCG
12
-
2
GGCGCG
UKMR15_RS02940
653278
654297
+
Genic
-800
NZ_LR595896.1
654834
654848
CG
14
+
7
GC
UKMR15_RS02945
654405
655052
+
Genic
-429
NZ_LR595896.1
654949
654963
CG
14
+
7
CG
UKMR15_RS02945
654405
655052
+
Genic
-544
NZ_LR595896.1
655212
655224
AGCCGC
12
-
2
TGCGGC
ubiB
655065
656642
+
Genic
-147
NZ_LR595896.1
655359
655374
ATCGCG
15
+
2
TCGCGA
ubiB
655065
656642
+
Genic
-294
NZ_LR595896.1
655499
655511
ACCGCG
12
-
2
GCGGTC
ubiB
655065
656642
+
Genic
-434
NZ_LR595896.1
656587
656601
CCCGCG
14
-
2
GGGCGC
ubiB
655065
656642
+
Genic
-1522