Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1351 to 1375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
864424
864437
AACGCG
13
-
2
TTCGCG
UKMR15_RS03840
864203
865051
+
Genic
-221
NZ_LR595896.1
866215
866228
AGCGGC
13
+
2
GGCAGC
ugpC
865807
866919
+
Genic
-408
NZ_LR595896.1
867345
867357
ACGGCG
12
-
2
CGTCGC
UKMR15_RS03855
867128
868429
-
Genic
-217
NZ_LR595896.1
867648
867660
ATCCGC
12
-
2
GGATGC
UKMR15_RS03855
867128
868429
-
Genic
-520
NZ_LR595896.1
868454
868466
CCCCGG
12
-
2
GCCGGG
UKMR15_RS03855
867128
868429
-
Intergenic
-1326
NZ_LR595896.1
868458
868470
CCCGG
12
-
2
GGGCC
UKMR15_RS03855
867128
868429
-
Intergenic
-1330
NZ_LR595896.1
868855
868867
CCG
12
-
4
GCG
UKMR15_RS03860
868890
869774
-
Intergenic
23
NZ_LR595896.1
870295
870307
ACGCGC
12
+
2
CGCACG
UKMR15_RS03860
868890
869774
-
Intergenic
-1405
NZ_LR595896.1
871071
871084
CCCGCG
13
-
2
GGCGCG
UKMR15_RS03870
871104
872315
+
Intergenic
20
NZ_LR595896.1
871180
871193
AGCGCG
13
-
2
GCTCGC
UKMR15_RS03870
871104
872315
+
Genic
-76
NZ_LR595896.1
871546
871564
ATCGCG
18
+
3
CGCGAT
UKMR15_RS03870
871104
872315
+
Genic
-442
NZ_LR595896.1
871954
871967
AGCGCG
13
-
2
GCTCGC
UKMR15_RS03870
871104
872315
+
Genic
-850
NZ_LR595896.1
872210
872222
CCCGCG
12
-
2
GGCGCG
UKMR15_RS03870
871104
872315
+
Genic
-1106
NZ_LR595896.1
872796
872809
ACGCCG
13
+
2
GCCGAC
UKMR15_RS03875
872488
873435
-
Genic
-308
NZ_LR595896.1
873700
873714
CCGCG
14
+
2
GCCGC
xylB
873522
875003
-
Genic
-178
NZ_LR595896.1
873870
873883
AGCGCG
13
+
2
GCGAGC
xylB
873522
875003
-
Genic
-348
NZ_LR595896.1
874297
874310
CCG
13
+
4
CGC
xylB
873522
875003
-
Genic
-775
NZ_LR595896.1
875738
875751
CCGG
13
+
3
GGCC
UKMR15_RS03885
875114
876556
-
Genic
-624
NZ_LR595896.1
875932
875944
CCGCG
12
+
2
GCCGC
UKMR15_RS03885
875114
876556
-
Genic
-818
NZ_LR595896.1
876664
876676
ATCGC
12
-
2
GCGAT
UKMR15_RS03890
876728
877642
-
Intergenic
52
NZ_LR595896.1
878753
878768
CCGCG
15
+
3
CGCGC
UKMR15_RS03895
877743
879362
+
Genic
-1010
NZ_LR595896.1
879340
879357
ACGTCG
17
+
2
CGTCGA
UKMR15_RS03895
877743
879362
+
Genic
-1597
NZ_LR595896.1
880995
881007
CCCGCG
12
-
2
GGCGCG
UKMR15_RS03905
880954
881910
+
Genic
-41
NZ_LR595896.1
881251
881263
CG
12
+
6
GC
UKMR15_RS03905
880954
881910
+
Genic
-297
NZ_LR595896.1
881682
881695
ACGCCG
13
-
2
GGCGTC
UKMR15_RS03905
880954
881910
+
Genic
-728