Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1651 to 1675 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
1061121
1061133
CCGCG
12
-
2
CGCGG
UKMR15_RS04725
1061329
1061508
+
Intergenic
196
NZ_LR595896.1
1061472
1061487
CCCG
15
-
3
GGCG
UKMR15_RS04725
1061329
1061508
+
Genic
-143
NZ_LR595896.1
1062125
1062137
ACGTCG
12
+
2
TCGACG
hemC
1061543
1062532
+
Genic
-582
NZ_LR595896.1
1062185
1062197
CCGCG
12
+
2
CGCGC
hemC
1061543
1062532
+
Genic
-642
NZ_LR595896.1
1062421
1062434
AGCGCG
13
-
2
GCGCTC
hemC
1061543
1062532
+
Genic
-878
NZ_LR595896.1
1062505
1062517
AAGCGC
12
+
2
GCGCAA
hemC
1061543
1062532
+
Genic
-962
NZ_LR595896.1
1062718
1062730
AACACG
12
-
2
TCGTGT
hemDX
1062532
1064511
+
Genic
-186
NZ_LR595896.1
1062844
1062856
CCCGCG
12
+
2
CCGCGC
hemDX
1062532
1064511
+
Genic
-312
NZ_LR595896.1
1063493
1063509
CCGCG
16
-
3
GCGGC
hemDX
1062532
1064511
+
Genic
-961
NZ_LR595896.1
1063541
1063553
CCGCGG
12
+
2
CGCGGC
hemDX
1062532
1064511
+
Genic
-1009
NZ_LR595896.1
1064890
1064902
CCGCGG
12
+
2
GCCGCG
UKMR15_RS04740
1064516
1065706
+
Genic
-374
NZ_LR595896.1
1065188
1065200
AGGCGC
12
-
2
TGCGCC
UKMR15_RS04740
1064516
1065706
+
Genic
-672
NZ_LR595896.1
1065812
1065826
CCGCG
14
+
2
GCGCC
UKMR15_RS04745
1065875
1067182
-
Intergenic
49
NZ_LR595896.1
1066203
1066215
CCG
12
+
4
CCG
UKMR15_RS04745
1065875
1067182
-
Genic
-328
NZ_LR595896.1
1068301
1068316
AGCGCG
15
+
2
CGCGAG
UKMR15_RS04755
1068068
1069507
-
Genic
-233
NZ_LR595896.1
1068516
1068528
AGC
12
-
4
GCT
UKMR15_RS04755
1068068
1069507
-
Genic
-448
NZ_LR595896.1
1069859
1069871
ACGGCG
12
+
2
GGCGAC
ppa
1069668
1070195
+
Genic
-191
NZ_LR595896.1
1070593
1070605
AAAGG
12
-
2
TTCCT
UKMR15_RS04765
1070254
1071108
-
Genic
-339
NZ_LR595896.1
1070691
1070703
ACGCCG
12
-
2
CGGCGT
UKMR15_RS04765
1070254
1071108
-
Genic
-437
NZ_LR595896.1
1070858
1070870
ACGCGC
12
-
2
GCGTGC
UKMR15_RS04765
1070254
1071108
-
Genic
-604
NZ_LR595896.1
1071087
1071100
ACAGAT
13
+
2
CAGATA
UKMR15_RS04765
1070254
1071108
-
Genic
-833
NZ_LR595896.1
1071199
1071212
CCGCG
13
+
2
CGCCG
UKMR15_RS04770
1071087
1071476
-
Genic
-112
NZ_LR595896.1
1071292
1071306
CCG
14
+
4
GCC
UKMR15_RS04770
1071087
1071476
-
Genic
-205
NZ_LR595896.1
1071321
1071333
CG
12
+
6
CG
UKMR15_RS04770
1071087
1071476
-
Genic
-234
NZ_LR595896.1
1071682
1071694
CCCGCG
12
-
2
GCGCGG
UKMR15_RS04770
1071087
1071476
-
Intergenic
-595