Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 201 to 225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
120713
120725
ACTGCT
12
+
2
GCTACT
UKMR15_RS00560
120266
121378
+
Genic
-447
NZ_LR595896.1
120809
120821
AACGGC
12
+
2
ACGGCA
UKMR15_RS00560
120266
121378
+
Genic
-543
NZ_LR595896.1
120922
120937
CCCGCG
15
-
2
GGCGCG
UKMR15_RS00560
120266
121378
+
Genic
-656
NZ_LR595896.1
120950
120962
AACGGC
12
-
2
TGCCGT
UKMR15_RS00560
120266
121378
+
Genic
-684
NZ_LR595896.1
121562
121575
AGCGCG
13
-
2
CTCGCG
aguB
121389
122264
+
Genic
-173
NZ_LR595896.1
123043
123056
CCCG
13
-
3
GGCG
UKMR15_RS00570
122401
122865
-
Intergenic
-642
NZ_LR595896.1
124333
124345
ACCGGC
12
-
2
GCCGGT
UKMR15_RS00575
123264
124355
+
Genic
-1069
NZ_LR595896.1
125447
125459
ACGAGG
12
+
2
CGAGGA
UKMR15_RS00585
125380
126204
-
Genic
-67
NZ_LR595896.1
126169
126182
AAAGAG
13
+
2
AGAAAG
UKMR15_RS00585
125380
126204
-
Genic
-789
NZ_LR595896.1
127893
127905
ACCATC
12
-
2
TGGTGA
UKMR15_RS00605
127248
128117
+
Genic
-645
NZ_LR595896.1
129319
129334
ACCGG
15
-
3
CCGGT
UKMR15_RS00610
128238
129254
-
Intergenic
-1081
NZ_LR595896.1
130818
130831
AAAAGC
13
+
2
CAAAAG
UKMR15_RS00615
129693
130748
+
Intergenic
-1125
NZ_LR595896.1
131073
131085
CCGCGG
12
+
2
CGGCCG
UKMR15_RS00620
130973
133582
-
Genic
-100
NZ_LR595896.1
131134
131146
AACTCG
12
+
2
CTCGAA
UKMR15_RS00620
130973
133582
-
Genic
-161
NZ_LR595896.1
131628
131640
AGATCG
12
+
2
TCGAGA
UKMR15_RS00620
130973
133582
-
Genic
-655
NZ_LR595896.1
133123
133135
ACATGG
12
-
2
CATGTC
UKMR15_RS00620
130973
133582
-
Genic
-2150
NZ_LR595896.1
134333
134345
AGCTCC
12
+
2
CCAGCT
dprA
134224
135414
-
Genic
-109
NZ_LR595896.1
134992
135004
ACGCG
12
-
2
CGCGT
dprA
134224
135414
-
Genic
-768
NZ_LR595896.1
135812
135826
ACGATC
14
-
2
CGTGAT
UKMR15_RS00635
135643
136146
+
Genic
-169
NZ_LR595896.1
135963
135976
ACGCGC
13
-
2
GTGCGC
UKMR15_RS00635
135643
136146
+
Genic
-320
NZ_LR595896.1
136222
136234
CCG
12
-
4
GCG
UKMR15_RS00640
136178
137161
+
Genic
-44
NZ_LR595896.1
136553
136568
CCGCG
15
-
3
GGCGC
UKMR15_RS00640
136178
137161
+
Genic
-375
NZ_LR595896.1
137968
137980
CCG
12
+
4
CGC
htpX
138027
138884
+
Intergenic
47
NZ_LR595896.1
139502
139514
AACGGG
12
-
2
TTCCCG
rsmB
139486
140895
+
Genic
-16
NZ_LR595896.1
141165
141179
ACACCG
14
-
2
CGGTGT
UKMR15_RS00660
140892
141482
+
Genic
-273