Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 5651 to 5675 repeats of 1284974
Go To:
<<
<
225
226
227
228
229
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
4155438
4155451
AATAT
13
+
2
ATATA
ENSGALT00000083042.2
4150754
4175348
+
Intron
4684
chr1
4156337
4156349
A
12
-
12
T
ENSGALT00000083042.2
4150754
4175348
+
Intron
5583
chr1
4156396
4156408
A
12
-
12
T
ENSGALT00000083042.2
4150754
4175348
+
Intron
5642
chr1
4157114
4157131
AGCGG
17
-
3
GCTCC
ENSGALT00000083042.2
4150754
4175348
+
Intron
6360
chr1
4157298
4157311
AGC
13
-
4
CTG
ENSGALT00000083042.2
4150754
4175348
+
Intron
6544
chr1
4157691
4157703
ACGGGG
12
+
2
ACGGGG
ENSGALT00000049952.2
4157562
4175957
+
Intron
129
chr1
4158265
4158277
ACAGC
12
-
2
CTGTG
ENSGALT00000049952.2
4157562
4175957
+
Intron
703
chr1
4158608
4158626
AGGG
18
+
4
GGGA
ENSGALT00000049952.2
4157562
4175957
+
Intron
1046
chr1
4158980
4158994
A
14
-
14
T
ENSGALT00000049952.2
4157562
4175957
+
Intron
1418
chr1
4159674
4159686
AGGGGG
12
+
2
GGGAGG
ENSGALT00000049952.2
4157562
4175957
+
Intron
2112
chr1
4161237
4161251
AAAC
14
-
3
TTTG
ENSGALT00000049952.2
4157562
4175957
+
Intron
3675
chr1
4161404
4161416
AGCTC
12
+
2
CAGCT
ENSGALT00000049952.2
4157562
4175957
+
Intron
3842
chr1
4163067
4163079
AGCCC
12
-
2
GGGCT
ENSGALT00000049952.2
4157562
4175957
+
Intron
5505
chr1
4164014
4164026
AGAGG
12
+
2
GGAGA
ENSGALT00000049952.2
4157562
4175957
+
Exon
6452
chr1
4164791
4164804
AGCTC
13
+
2
CAGCT
ENSGALT00000049952.2
4157562
4175957
+
Intron
7229
chr1
4167421
4167433
ACTGGC
12
+
2
GCACTG
ENSGALT00000049952.2
4157562
4175957
+
Exon
9859
chr1
4167821
4167834
ACACC
13
-
2
GTGGT
ENSGALT00000049952.2
4157562
4175957
+
Intron
10259
chr1
4167829
4167845
AC
16
-
8
GT
ENSGALT00000049952.2
4157562
4175957
+
Intron
10267
chr1
4168689
4168702
AAAG
13
-
3
TTTC
ENSGALT00000049952.2
4157562
4175957
+
Intron
11127
chr1
4169031
4169043
ACAGGG
12
-
2
TCCCTG
ENSGALT00000049952.2
4157562
4175957
+
Intron
11469
chr1
4169204
4169216
AAAGC
12
-
2
TTGCT
ENSGALT00000049952.2
4157562
4175957
+
Intron
11642
chr1
4170895
4170908
AAAAAT
13
-
2
TTTATT
ENSGALT00000049952.2
4157562
4175957
+
Intron
13333
chr1
4171161
4171176
AAAC
15
-
3
GTTT
ENSGALT00000049952.2
4157562
4175957
+
Intron
13599
chr1
4171521
4171533
ACATGG
12
-
2
CCATGT
ENSGALT00000049952.2
4157562
4175957
+
Intron
13959
chr1
4171584
4171596
AGGG
12
-
3
CCCT
ENSGALT00000049952.2
4157562
4175957
+
Intron
14022