Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6676 to 6700 repeats of 1284974
Go To:
<<
<
266
267
268
269
270
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
5074873
5074898
A
25
-
25
T
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
39979
chr1
5076121
5076134
A
13
+
13
A
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
41227
chr1
5077733
5077756
AT
23
+
11
TA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
42839
chr1
5077753
5077768
ACAT
15
-
3
TATG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
42859
chr1
5079398
5079413
AAGCTT
15
+
2
GCTTAA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
44504
chr1
5079614
5079626
AAATCT
12
-
2
TAGATT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
44720
chr1
5081338
5081351
AAAGCC
13
+
2
GCCAAA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
46444
chr1
5081501
5081514
AAACAG
13
-
2
TTTCTG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
46607
chr1
5082866
5082878
ATGCC
12
+
2
CATGC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
47972
chr1
5084950
5084963
A
13
+
13
A
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
50056
chr1
5086428
5086443
AAAAC
15
+
3
AAACA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
51534
chr1
5087589
5087606
AAC
17
+
5
AAC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
52695
chr1
5088246
5088259
AGGG
13
-
3
TCCC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
53352
chr1
5088929
5088946
A
17
-
17
T
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
54035
chr1
5091590
5091614
A
24
+
24
A
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
56696
chr1
5093363
5093377
ACATAT
14
-
2
TGTATA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
58469
chr1
5093461
5093474
ACATAT
13
-
2
TGTATA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
58567
chr1
5094353
5094365
ACAGAG
12
+
2
GAGACA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
59459
chr1
5094686
5094701
A
15
-
15
T
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
59792
chr1
5095374
5095386
ACTC
12
+
3
CTCA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
60480
chr1
5096291
5096303
AACC
12
-
3
GTTG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
61397
chr1
5096336
5096348
ACCTGC
12
+
2
CTGCAC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
61442
chr1
5096420
5096432
AAAAAG
12
-
2
TCTTTT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
61526
chr1
5100981
5101004
A
23
-
23
T
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
66087
chr1
5102593
5102605
AAAAAC
12
-
2
TTTTTG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
67699