Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6701 to 6725 repeats of 1284974
Go To:
<<
<
267
268
269
270
271
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
5105471
5105485
AATCAC
14
-
2
TTGTGA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
70577
chr1
5107086
5107101
AACAAT
15
-
2
ATTGTT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
72192
chr1
5107096
5107111
AAT
15
-
5
TTA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
72202
chr1
5107750
5107762
AATAG
12
+
2
ATAGA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
72856
chr1
5110320
5110332
AACC
12
+
3
CCAA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
75426
chr1
5110368
5110380
ACATCC
12
+
2
CCACAT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
75474
chr1
5111804
5111816
AACTAT
12
-
2
TAGTTA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
76910
chr1
5112266
5112287
A
21
+
21
A
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
77372
chr1
5113120
5113134
AAG
14
-
4
TTC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
78226
chr1
5114606
5114619
AAAATG
13
-
2
ATTTTC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
79712
chr1
5116804
5116816
ACC
12
+
4
CCA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
81910
chr1
5117560
5117573
ACTCCC
13
-
2
GGAGTG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
82666
chr1
5117779
5117791
ACTCT
12
+
2
CTCTA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
82885
chr1
5118597
5118611
AAT
14
+
4
AAT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
83703
chr1
5118659
5118672
AAAAC
13
+
2
AAACA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
83765
chr1
5118663
5118675
AAAAAC
12
+
2
AAAACA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
83769
chr1
5120138
5120158
A
20
-
20
T
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
85244
chr1
5121681
5121693
AATGT
12
+
2
TAATG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
86787
chr1
5122298
5122316
A
18
+
18
A
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
87404
chr1
5123378
5123390
AAAG
12
+
3
GAAA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
88484
chr1
5123542
5123554
AAACAG
12
+
2
AAACAG
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
88648
chr1
5124227
5124239
AT
12
+
6
TA
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
89333
chr1
5124987
5124999
AAATAG
12
-
2
ATTTCT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
90093
chr1
5125175
5125193
AAAC
18
-
4
TTGT
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
90281
chr1
5126163
5126175
AAAAAG
12
-
2
TTTTTC
ENSGALT00000092391.1
5034894
5054920
+
Intergenic
91269