Showing repeats of Gallus gallus (Chicken)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8776 to 8800 repeats of 1284974
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
chr1
6531229
6531243
A
14
+
14
A
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
15852
chr1
6533460
6533472
ACACTC
12
+
2
ACACTC
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
18083
chr1
6533661
6533674
AAAAAT
13
+
2
TAAAAA
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
18284
chr1
6534642
6534655
AAGCAG
13
+
2
AGCAGA
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
19265
chr1
6535286
6535300
AAAAG
14
-
2
TTTTC
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
19909
chr1
6535919
6535931
AAAT
12
-
3
ATTT
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
20542
chr1
6537271
6537283
ACAGCC
12
+
2
CCACAG
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
21894
chr1
6537594
6537606
AACAGT
12
+
2
TAACAG
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
22217
chr1
6538564
6538576
ACACAT
12
+
2
ACATAC
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
23187
chr1
6538949
6538961
AAATTC
12
+
2
ATTCAA
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
23572
chr1
6539124
6539136
AGCCTG
12
-
2
AGGCTC
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
23747
chr1
6539461
6539478
A
17
+
17
A
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
24084
chr1
6541648
6541675
A
27
+
27
A
ENSGALT00000091103.1
6515377
6517033
+
Intergenic
26271
chr1
6543247
6543260
AATCAT
13
+
2
TAATCA
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
136112
chr1
6543283
6543295
AC
12
+
6
CA
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
136077
chr1
6545290
6545302
AGG
12
-
4
CCT
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
134070
chr1
6545418
6545430
ATCCC
12
-
2
TGGGA
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
133942
chr1
6546382
6546394
A
12
+
12
A
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
132978
chr1
6546389
6546402
AAAAAG
13
+
2
AAAAAG
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
132970
chr1
6546397
6546409
AAAGAC
12
+
2
AAAGAC
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
132963
chr1
6547185
6547200
AAAGAG
15
+
2
AGAAAG
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
132172
chr1
6547343
6547356
AAAAG
13
+
2
AAAGA
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
132016
chr1
6547528
6547540
AATCAG
12
+
2
CAGAAT
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
131832
chr1
6551881
6551893
ACATCC
12
+
2
CCACAT
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
127479
chr1
6556122
6556135
ACCTGG
13
+
2
CCTGGA
ENSGALT00000071983.2
6569105
6679372
-
Intergenic
123237