MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 2626 to 2650 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1800547 1800562 AAAAAG 15 + 2 AAAAGA AT1G05930 1799418 1800933 + Genic 1129
NC_003070.9 1801375 1801387 AAACTG 12 - 2 TTTCAG CAT9 1801110 1804000 - Exon 2613
NC_003070.9 1801944 1801958 AAAAT 14 - 2 TTTTA CAT9 1801110 1804000 - Exon 2042
NC_003070.9 1802298 1802310 AAGTAT 12 + 2 AAGTAT CAT9 1801110 1804000 - Intron 1690
NC_003070.9 1802627 1802639 AT 12 + 6 AT CAT9 1801110 1804000 - Intron 1361
NC_003070.9 1804738 1804753 AACATC 15 + 2 CATCAA AT1G05950 1804401 1807670 - Genic 2917
NC_003070.9 1805166 1805178 ACATAT 12 - 2 GTATAT AT1G05950 1804401 1807670 - Genic 2492
NC_003070.9 1806444 1806456 AAAGT 12 + 2 GTAAA AT1G05950 1804401 1807670 - Genic 1214
NC_003070.9 1807621 1807644 AG 23 - 11 CT AT1G05950 1804401 1807670 - Genic 26
NC_003070.9 1807678 1807692 AAT 14 - 4 TTA AT1G05950 1804401 1807670 - Intergenic -8
NC_003070.9 1808669 1808681 AACTG 12 + 2 ACTGA AT1G05960 1807960 1815568 - Genic 6887
NC_003070.9 1810362 1810374 ATGCC 12 - 2 ATGGC AT1G05960 1807960 1815568 - Genic 5194
NC_003070.9 1811104 1811117 AC 13 - 6 GT AT1G05960 1807960 1815568 - Genic 4451
NC_003070.9 1815144 1815156 AAC 12 + 4 ACA AT1G05960 1807960 1815568 - Genic 412
NC_003070.9 1815358 1815370 AGAGAT 12 + 2 AGAGAT AT1G05960 1807960 1815568 - Genic 198
NC_003070.9 1815535 1815549 AG 14 - 7 CT AT1G05960 1807960 1815568 - Genic 19
NC_003070.9 1818967 1818980 ACCATC 13 - 2 TGATGG AT1G05990 1818392 1819184 + Genic 575
NC_003070.9 1819909 1819923 AAAAAC 14 - 2 TTTTTG AT1G06002 1820254 1821887 + Intergenic -331
NC_003070.9 1820128 1820146 A 18 + 18 A AT1G06002 1820254 1821887 + Intergenic -108
NC_003070.9 1821588 1821600 AAAAGG 12 + 2 AAGGAA AT1G06000 1820308 1821894 - Genic 294
NC_003070.9 1821785 1821799 AAC 14 - 4 GTT AT1G06000 1820308 1821894 - Genic 95
NC_003070.9 1821814 1821827 AAAG 13 - 3 TTTC AT1G06000 1820308 1821894 - Genic 67
NC_003070.9 1822014 1822028 AAACC 14 - 2 TGGTT AT1G06000 1820308 1821894 - Intergenic -120
NC_003070.9 1823549 1823562 AACCAG 13 + 2 GAACCA AT1G06010 1822583 1824236 + Genic 966
NC_003070.9 1824233 1824249 A 16 - 16 T AT1G06010 1822583 1824236 + Genic 1650