MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3001 to 3025 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2076932 2076947 AAGGCT 15 - 2 CTTAGC AT1G04503 2076515 2076998 + Genic 417
NC_003070.9 2077889 2077901 ACATCC 12 - 2 GTGGAT AT1G06760 2076504 2077767 - Intergenic -122
NC_003070.9 2077979 2077991 AAAAAC 12 - 2 GTTTTT AT1G06760 2076504 2077767 - Intergenic -212
NC_003070.9 2078977 2078990 AAG 13 + 4 AGA DRIP1 2078880 2082097 - Exon 3107
NC_003070.9 2079155 2079167 AAAAG 12 + 2 GAAAA DRIP1 2078880 2082097 - Exon 2930
NC_003070.9 2079797 2079809 AAGAG 12 + 2 AAGAG DRIP1 2078880 2082097 - Intron 2288
NC_003070.9 2081930 2081942 AAAAT 12 - 2 TTTTA DRIP1 2078880 2082097 - Exon 155
NC_003070.9 2082837 2082849 A 12 + 12 A GAUT6 2083311 2087141 + Intergenic -462
NC_003070.9 2083330 2083342 AAATT 12 - 2 TTAAT GAUT6 2083311 2087141 + Exon 19
NC_003070.9 2083827 2083839 AAATG 12 - 2 TTTCA GAUT6 2083311 2087141 + Exon 516
NC_003070.9 2083922 2083935 AAGACC 13 - 2 GTCTTG GAUT6 2083311 2087141 + Intron 611
NC_003070.9 2085056 2085068 AAGGAC 12 + 2 AAGGAC GAUT6 2083311 2087141 + Exon 1745
NC_003070.9 2085141 2085153 AACTAC 12 + 2 TACAAC GAUT6 2083311 2087141 + Intron 1830
NC_003070.9 2086248 2086260 AC 12 + 6 AC GAUT6 2083311 2087141 + Intron 2937
NC_003070.9 2086857 2086875 A 18 + 18 A GAUT6 2083311 2087141 + Exon 3546
NC_003070.9 2087133 2087146 AACCG 13 - 2 GTTCG GAUT6 2083311 2087141 + Exon 3822
NC_003070.9 2087216 2087228 AAG 12 - 4 TTC AT1G06790 2087182 2089786 + Genic 34
NC_003070.9 2089825 2089837 AATACT 12 + 2 ATACTA PLA-I{gamma}1 2089417 2091686 - Intron 1849
NC_003070.9 2091053 2091065 AAATCG 12 + 2 ATCGAA PLA-I{gamma}1 2089417 2091686 - Exon 621
NC_003070.9 2092722 2092734 AATG 12 + 3 TGAA AT1G06810 2091738 2092539 - Intergenic -183
NC_003070.9 2093488 2093505 AGAT 17 - 4 TATC CRTISO 2092946 2096784 - Intron 3279
NC_003070.9 2094440 2094452 AAAAAG 12 - 2 TTCTTT CRTISO 2092946 2096784 - Intron 2332
NC_003070.9 2094720 2094732 AATAC 12 - 2 TTGTA CRTISO 2092946 2096784 - Exon 2052
NC_003070.9 2094854 2094867 AAAAT 13 + 2 AAAAT CRTISO 2092946 2096784 - Intron 1917
NC_003070.9 2096079 2096095 AAG 16 - 5 CTT CRTISO 2092946 2096784 - Exon 689