MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 2951 to 2975 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2040397 2040409 AAAAG 12 - 2 TTTTC JASON 2037311 2040419 - Exon 10
NC_003070.9 2040571 2040584 AAG 13 + 4 GAA NIH 2040410 2047655 + Exon 161
NC_003070.9 2041162 2041174 AAAAAG 12 + 2 AAAGAA NIH 2040410 2047655 + Exon 752
NC_003070.9 2045820 2045832 AAAAT 12 - 2 TTATT NIH 2040410 2047655 + Intron 5410
NC_003070.9 2046115 2046127 AAACCC 12 - 2 TTGGGT NIH 2040410 2047655 + Exon 5705
NC_003070.9 2046745 2046757 AATGAG 12 + 2 AATGAG NIH 2040410 2047655 + Exon 6335
NC_003070.9 2046829 2046841 AATGAG 12 + 2 AATGAG NIH 2040410 2047655 + Exon 6419
NC_003070.9 2047192 2047204 AAAAAG 12 + 2 AAAAAG NIH 2040410 2047655 + Exon 6782
NC_003070.9 2048194 2048208 AAAAT 14 + 2 ATAAA PSBP-1 2047634 2049439 + Intron 560
NC_003070.9 2048270 2048283 AAAAAT 13 - 2 TATTTT PSBP-1 2047634 2049439 + Intron 636
NC_003070.9 2048713 2048726 AATAG 13 + 2 ATAGA PSBP-1 2047634 2049439 + Intron 1079
NC_003070.9 2048895 2048907 AC 12 - 6 TG PSBP-1 2047634 2049439 + Intron 1261
NC_003070.9 2049416 2049429 AAATCT 13 + 2 CTAAAT PSBP-1 2047634 2049439 + Exon 1782
NC_003070.9 2049935 2049947 AACAC 12 + 2 CACAA AT1G06690 2049400 2052170 - Genic 2223
NC_003070.9 2050055 2050067 AAAAAG 12 + 2 GAAAAA AT1G06690 2049400 2052170 - Genic 2103
NC_003070.9 2052028 2052040 ATGGCC 12 + 2 GCCATG AT1G06690 2049400 2052170 - Genic 130
NC_003070.9 2052087 2052109 AAG 22 + 7 AAG AT1G06690 2049400 2052170 - Genic 61
NC_003070.9 2052202 2052214 AAAAAC 12 + 2 CAAAAA AT1G06690 2049400 2052170 - Intergenic -32
NC_003070.9 2052309 2052333 A 24 - 24 T AT1G06700 2052370 2055548 - Intergenic 3215
NC_003070.9 2052353 2052365 AAG 12 + 4 AAG AT1G06700 2052370 2055548 - Intergenic 3183
NC_003070.9 2055202 2055214 ATC 12 - 4 GAT AT1G06700 2052370 2055548 - Genic 334
NC_003070.9 2055214 2055234 AG 20 + 10 AG AT1G06700 2052370 2055548 - Genic 314
NC_003070.9 2055274 2055286 AAAAAG 12 + 2 AAAAAG AT1G06700 2052370 2055548 - Genic 262
NC_003070.9 2055317 2055329 AAGGG 12 - 2 CCCTT AT1G06700 2052370 2055548 - Genic 219
NC_003070.9 2055347 2055362 AG 15 - 7 TC AT1G06700 2052370 2055548 - Genic 186