MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 2901 to 2925 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1996956 1996970 AAAAG 14 + 2 AAAAG GPAT1 1993903 1996355 - Intergenic -601
NC_003070.9 1997639 1997651 AAATAC 12 - 2 TTTGTA GPAT1 1993903 1996355 - Intergenic -1284
NC_003070.9 1998709 1998721 ACATAT 12 - 2 TATATG GPAT1 1993903 1996355 - Intergenic -2354
NC_003070.9 1999124 1999136 AAAAAG 12 - 2 TTTTCT PMD2 2001382 2002802 + Intergenic -2246
NC_003070.9 1999438 1999450 AAAAT 12 + 2 AAAAT PMD2 2001382 2002802 + Intergenic -1932
NC_003070.9 2000177 2000190 AAAT 13 - 3 TTAT PMD2 2001382 2002802 + Intergenic -1192
NC_003070.9 2002010 2002023 AGGCGG 13 + 2 GGCGGA PMD2 2001382 2002802 + Exon 628
NC_003070.9 2002227 2002239 AAGGAG 12 + 2 AAGGAG PMD2 2001382 2002802 + Exon 845
NC_003070.9 2002533 2002547 AACTGC 14 - 2 GTTGCA PMD2 2001382 2002802 + Exon 1151
NC_003070.9 2003033 2003046 AAGAC 13 - 2 TCTTG AT1G06540 2001406 2003446 - Genic 400
NC_003070.9 2004202 2004214 AAAGAC 12 - 2 TTGTCT AT1G06550 2003627 2007212 - Genic 2998
NC_003070.9 2006788 2006800 AACAAG 12 + 2 AGAACA AT1G06550 2003627 2007212 - Genic 412
NC_003070.9 2007765 2007777 AGATGG 12 + 2 AGATGG AT1G06560 2007615 2012006 + Genic 150
NC_003070.9 2008163 2008176 AAAAAC 13 - 2 TTTTGT AT1G06560 2007615 2012006 + Genic 548
NC_003070.9 2009229 2009241 AAAGTT 12 - 2 TTTAAC AT1G06560 2007615 2012006 + Genic 1614
NC_003070.9 2009476 2009488 AAAACG 12 - 2 TTTTCG AT1G06560 2007615 2012006 + Genic 1861
NC_003070.9 2013476 2013490 AAAACT 14 + 2 CTAAAA PDS1 2011885 2013545 - Exon 55
NC_003070.9 2013555 2013568 AAAAT 13 - 2 TTATT PDS1 2011885 2013545 - Intergenic -10
NC_003070.9 2013565 2013578 AAAATT 13 + 2 TTAAAA PDS1 2011885 2013545 - Intergenic -20
NC_003070.9 2014220 2014233 AAACC 13 + 2 CCAAA AT1G06580 2013996 2016273 - Genic 2040
NC_003070.9 2014376 2014388 ACCATC 12 - 2 TGGTGA AT1G06580 2013996 2016273 - Genic 1885
NC_003070.9 2015404 2015416 AATCCC 12 + 2 ATCCCA AT1G06580 2013996 2016273 - Genic 857
NC_003070.9 2015914 2015931 AATCAC 17 + 2 CAATCA AT1G06580 2013996 2016273 - Genic 342
NC_003070.9 2017575 2017588 A 13 + 13 A AT1G06590 2016306 2024749 - Genic 7161
NC_003070.9 2020446 2020459 AGAT 13 - 3 CTAT AT1G06590 2016306 2024749 - Genic 4290