MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3076 to 3100 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2128062 2128074 AAAAG 12 + 2 AAGAA AT1G06925 2127704 2128611 - Genic 537
NC_003070.9 2128087 2128104 AT 17 + 8 AT AT1G06925 2127704 2128611 - Genic 507
NC_003070.9 2128717 2128730 AACTAT 13 + 2 TATAAC AT1G06925 2127704 2128611 - Intergenic -106
NC_003070.9 2129017 2129030 AATCTG 13 + 2 TGAATC AT1G06930 2128843 2129883 + Genic 174
NC_003070.9 2129328 2129343 AATCAG 15 - 2 ATTCTG AT1G06930 2128843 2129883 + Genic 485
NC_003070.9 2129490 2129503 AAG 13 - 4 CTT AT1G06930 2128843 2129883 + Genic 647
NC_003070.9 2130228 2130240 AAATTC 12 + 2 TTCAAA TIC110 2130053 2135703 - Exon 5463
NC_003070.9 2130366 2130379 AACTGC 13 - 2 GCAGTT TIC110 2130053 2135703 - Exon 5324
NC_003070.9 2130573 2130587 ACAT 14 + 3 CATA TIC110 2130053 2135703 - Intron 5116
NC_003070.9 2131428 2131442 AAGATG 14 - 2 TCTTCA TIC110 2130053 2135703 - Exon 4261
NC_003070.9 2133252 2133264 AAAATT 12 + 2 TAAAAT TIC110 2130053 2135703 - Intron 2439
NC_003070.9 2133306 2133318 AAAAGC 12 + 2 CAAAAG TIC110 2130053 2135703 - Intron 2385
NC_003070.9 2135770 2135782 AACGGT 12 + 2 CGGTAA AT1G06960 2135810 2137838 + Intergenic -28
NC_003070.9 2136932 2136944 AAAAG 12 + 2 AAAAG AT1G06960 2135810 2137838 + Genic 1122
NC_003070.9 2137150 2137162 AAAGAG 12 - 2 TTTCTC AT1G06960 2135810 2137838 + Genic 1340
NC_003070.9 2137724 2137736 AAT 12 - 4 TTA AT1G06960 2135810 2137838 + Genic 1914
NC_003070.9 2137851 2137864 AG 13 - 6 TC CHX14 2137871 2140975 + Intergenic -7
NC_003070.9 2138283 2138295 ATC 12 + 4 TCA CHX14 2137871 2140975 + Exon 412
NC_003070.9 2140825 2140838 AAAAAG 13 - 2 TCTTTT CHX14 2137871 2140975 + Exon 2954
NC_003070.9 2141313 2141326 AAAAGC 13 + 2 CAAAAG CHX14 2137871 2140975 + Intergenic 3442
NC_003070.9 2141823 2141836 AAAAAG 13 + 2 AAGAAA CHX14 2137871 2140975 + Intergenic 3952
NC_003070.9 2142954 2142966 AAGAAT 12 - 2 TTATTC AT1G06980 2142939 2143977 - Genic 1011
NC_003070.9 2143127 2143139 AAAACC 12 + 2 CCAAAA AT1G06980 2142939 2143977 - Genic 838
NC_003070.9 2143559 2143571 AAGATC 12 + 2 CAAGAT AT1G06980 2142939 2143977 - Genic 406
NC_003070.9 2144559 2144572 AAATTT 13 + 2 ATTTAA AT1G06980 2142939 2143977 - Intergenic -582