MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3576 to 3600 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2511359 2511376 AAAAAC 17 + 2 AAAAAC ACA5 2511647 2513454 - Intergenic 2078
NC_003070.9 2511393 2511405 ACATAT 12 - 2 ATATGT ACA5 2511647 2513454 - Intergenic 2049
NC_003070.9 2512413 2512425 AACCTC 12 - 2 AGGTTG ACA5 2511647 2513454 - Intron 1029
NC_003070.9 2512587 2512600 A 13 + 13 A ACA5 2511647 2513454 - Intron 854
NC_003070.9 2512812 2512824 AAAAC 12 + 2 AACAA ACA5 2511647 2513454 - Intron 630
NC_003070.9 2513212 2513226 A 14 + 14 A ACA5 2511647 2513454 - Intron 228
NC_003070.9 2513416 2513428 AAGAAT 12 - 2 TCTTAT ACA5 2511647 2513454 - Exon 26
NC_003070.9 2514068 2514080 AAAATC 12 - 2 TTGATT OTP82 2514150 2516620 - Intergenic 2540
NC_003070.9 2516482 2516495 AAAGAG 13 + 2 AAGAGA OTP82 2514150 2516620 - Exon 125
NC_003070.9 2516556 2516568 AAG 12 + 4 AAG OTP82 2514150 2516620 - Exon 52
NC_003070.9 2516598 2516611 AAG 13 - 4 TCT OTP82 2514150 2516620 - Exon 9
NC_003070.9 2516803 2516815 AAACGT 12 + 2 TAAACG ACA7 2516991 2518611 - Intergenic 1796
NC_003070.9 2516896 2516909 AAAT 13 + 3 ATAA ACA7 2516991 2518611 - Intergenic 1702
NC_003070.9 2517057 2517069 AACC 12 - 3 GTTG ACA7 2516991 2518611 - Exon 1542
NC_003070.9 2518470 2518482 AAATCG 12 + 2 TCGAAA ACA7 2516991 2518611 - Exon 129
NC_003070.9 2518851 2518863 AAAAG 12 + 2 AAGAA ACA7 2516991 2518611 - Intergenic -240
NC_003070.9 2519163 2519178 A 15 + 15 A ACA7 2516991 2518611 - Intergenic -552
NC_003070.9 2520608 2520621 A 13 - 13 T ACA7 2516991 2518611 - Intergenic -1997
NC_003070.9 2521337 2521353 AAATTG 16 + 2 TTGAAA NRT2:1 2524023 2526322 + Intergenic -2670
NC_003070.9 2521617 2521635 A 18 + 18 A NRT2:1 2524023 2526322 + Intergenic -2388
NC_003070.9 2521730 2521742 AAATTC 12 - 2 TGAATT NRT2:1 2524023 2526322 + Intergenic -2281
NC_003070.9 2522146 2522160 A 14 - 14 T NRT2:1 2524023 2526322 + Intergenic -1863
NC_003070.9 2522470 2522482 AAAT 12 - 3 ATTT NRT2:1 2524023 2526322 + Intergenic -1541
NC_003070.9 2522630 2522642 AATTAT 12 + 2 ATTATA NRT2:1 2524023 2526322 + Intergenic -1381
NC_003070.9 2523235 2523247 AATATC 12 - 2 GATATT NRT2:1 2524023 2526322 + Intergenic -776