MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3601 to 3625 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2523471 2523486 AAAAC 15 + 3 CAAAA NRT2:1 2524023 2526322 + Intergenic -537
NC_003070.9 2525115 2525128 AACTC 13 - 2 GAGTT NRT2:1 2524023 2526322 + Exon 1092
NC_003070.9 2526359 2526371 AAGTAG 12 + 2 GTAGAA NRT2:1 2524023 2526322 + Intergenic 2336
NC_003070.9 2526971 2526984 AATACT 13 - 2 ATTAGT NRT2.2 2527170 2529120 - Intergenic 2136
NC_003070.9 2527065 2527077 ACACGT 12 + 2 ACACGT NRT2.2 2527170 2529120 - Intergenic 2043
NC_003070.9 2527139 2527156 AAAAAC 17 + 2 AAAAAC NRT2.2 2527170 2529120 - Intergenic 1964
NC_003070.9 2527961 2527976 AAAAAT 15 + 2 AAAATA NRT2.2 2527170 2529120 - Intron 1144
NC_003070.9 2529195 2529207 AAAAAG 12 + 2 AAAAAG NRT2.2 2527170 2529120 - Intergenic -75
NC_003070.9 2530086 2530100 AAATAT 14 + 2 ATAAAT NRT2.2 2527170 2529120 - Intergenic -966
NC_003070.9 2530514 2530530 AAAAT 16 - 3 ATTTT NRT2.2 2527170 2529120 - Intergenic -1394
NC_003070.9 2532462 2532474 AAAC 12 + 3 AACA AT1G08110 2535251 2537932 + Intergenic -2777
NC_003070.9 2534579 2534591 AG 12 + 6 GA AT1G08110 2535251 2537932 + Intergenic -660
NC_003070.9 2534586 2534599 AAGAG 13 + 2 AGAGA AT1G08110 2535251 2537932 + Intergenic -652
NC_003070.9 2535102 2535119 A 17 + 17 A AT1G08110 2535251 2537932 + Intergenic -132
NC_003070.9 2538533 2538546 AACCCT 13 - 2 TAGGGT AT1G08120 2538615 2539661 + Intergenic -69
NC_003070.9 2540335 2540347 AAC 12 + 4 AAC AT1G08125 2539614 2542362 - Genic 2015
NC_003070.9 2541484 2541496 AAAAT 12 + 2 AAATA AT1G08125 2539614 2542362 - Genic 866
NC_003070.9 2542471 2542483 AATTAC 12 + 2 ATTACA AT1G08125 2539614 2542362 - Intergenic -109
NC_003070.9 2545100 2545114 AAAAG 14 + 2 AAAAG LIG1 2542663 2547946 - Intron 2832
NC_003070.9 2545567 2545579 AAAAAG 12 - 2 TTTTCT LIG1 2542663 2547946 - Exon 2367
NC_003070.9 2546344 2546357 AAAAAC 13 + 2 ACAAAA LIG1 2542663 2547946 - Intron 1589
NC_003070.9 2549424 2549437 AAGATT 13 + 2 ATTAAG CHX6B 2548496 2551544 - Exon 2107
NC_003070.9 2550232 2550244 AAGG 12 + 3 GGAA CHX6B 2548496 2551544 - Exon 1300
NC_003070.9 2550474 2550487 AAGAT 13 + 2 AAGAT CHX6B 2548496 2551544 - Exon 1057
NC_003070.9 2551104 2551116 AACAAG 12 + 2 CAAGAA CHX6B 2548496 2551544 - Intron 428