MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3876 to 3900 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2723461 2723477 A 16 - 16 T ATRX 2723677 2733613 + Intergenic -200
NC_003070.9 2724120 2724132 ACGCAT 12 - 2 GTATGC ATRX 2723677 2733613 + Exon 443
NC_003070.9 2724824 2724837 AAGATG 13 + 2 AGATGA ATRX 2723677 2733613 + Exon 1147
NC_003070.9 2726060 2726072 AGCATC 12 - 2 CTGATG ATRX 2723677 2733613 + Intron 2383
NC_003070.9 2726361 2726376 AACTAC 15 - 2 TAGTTG ATRX 2723677 2733613 + Intron 2684
NC_003070.9 2728401 2728413 AAC 12 - 4 TTG ATRX 2723677 2733613 + Exon 4724
NC_003070.9 2728440 2728452 AACTGG 12 + 2 ACTGGA ATRX 2723677 2733613 + Exon 4763
NC_003070.9 2730228 2730240 AAACAT 12 - 2 TGTTTA ATRX 2723677 2733613 + Intron 6551
NC_003070.9 2730709 2730722 A 13 - 13 T ATRX 2723677 2733613 + Intron 7032
NC_003070.9 2733846 2733859 AATGGG 13 - 2 TTCCCA AT1G08610 2733596 2735819 - Genic 1960
NC_003070.9 2734966 2734978 AATGGT 12 - 2 CATTAC AT1G08610 2733596 2735819 - Genic 841
NC_003070.9 2735694 2735706 AAAAG 12 + 2 AAAAG AT1G08610 2733596 2735819 - Genic 113
NC_003070.9 2737507 2737519 AATG 12 + 3 ATGA PKDM7D 2736656 2743881 + Exon 851
NC_003070.9 2737830 2737842 AATGAC 12 + 2 ACAATG PKDM7D 2736656 2743881 + Exon 1174
NC_003070.9 2739284 2739296 AACTAC 12 + 2 TACAAC PKDM7D 2736656 2743881 + Intron 2628
NC_003070.9 2739559 2739574 AAAAAC 15 - 2 TTTTTG PKDM7D 2736656 2743881 + Intron 2903
NC_003070.9 2739865 2739877 AACATT 12 - 2 ATGTTA PKDM7D 2736656 2743881 + Intron 3209
NC_003070.9 2742527 2742540 AC 13 - 6 TG PKDM7D 2736656 2743881 + Intron 5871
NC_003070.9 2743912 2743925 AAAAG 13 + 2 GAAAA THA1 2743761 2747967 - Exon 4042
NC_003070.9 2745622 2745634 ATCGC 12 + 2 TCGCA THA1 2743761 2747967 - Exon 2333
NC_003070.9 2746695 2746707 A 12 + 12 A THA1 2743761 2747967 - Exon 1260
NC_003070.9 2746905 2746918 AAAG 13 + 3 AGAA THA1 2743761 2747967 - Exon 1049
NC_003070.9 2747263 2747279 AAAAAC 16 + 2 AAAACA THA1 2743761 2747967 - Intron 688
NC_003070.9 2747380 2747392 AAAAAC 12 + 2 AAAACA THA1 2743761 2747967 - Intron 575
NC_003070.9 2747846 2747858 AAG 12 + 4 AGA THA1 2743761 2747967 - Intron 109