MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 3926 to 3950 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 2761289 2761302 AG 13 + 6 AG AT1G08670 2760183 2761599 - Genic 297
NC_003070.9 2762089 2762106 AAAAAC 17 + 2 AAAAAC ZIGA4 2762584 2768967 + Intergenic -478
NC_003070.9 2763366 2763378 AAGGGG 12 - 2 CCTTCC ZIGA4 2762584 2768967 + Intron 782
NC_003070.9 2763816 2763828 AAAAT 12 - 2 TTTTA ZIGA4 2762584 2768967 + Intron 1232
NC_003070.9 2764177 2764189 AAAAAG 12 - 2 TTTTCT ZIGA4 2762584 2768967 + Intron 1593
NC_003070.9 2764210 2764223 AAAAT 13 - 2 TTTAT ZIGA4 2762584 2768967 + Intron 1626
NC_003070.9 2764264 2764276 AATGTC 12 + 2 TGTCAA ZIGA4 2762584 2768967 + Exon 1680
NC_003070.9 2764570 2764583 AAC 13 - 4 TGT ZIGA4 2762584 2768967 + Intron 1986
NC_003070.9 2764830 2764844 AAAAAG 14 - 2 TTTTCT ZIGA4 2762584 2768967 + Intron 2246
NC_003070.9 2764997 2765011 ATGC 14 + 3 TGCA ZIGA4 2762584 2768967 + Intron 2413
NC_003070.9 2769253 2769266 AAAAC 13 - 2 TTTTG SCRL3 2768965 2769508 - Intron 242
NC_003070.9 2769369 2769381 AGATAT 12 - 2 TCTATA SCRL3 2768965 2769508 - Intron 127
NC_003070.9 2770962 2771001 AAG 39 + 13 AAG PS1 2769615 2771477 - Intron 476
NC_003070.9 2771909 2771923 AAG 14 - 4 CTT AT1G08710 2771620 2773531 + Genic 289
NC_003070.9 2772552 2772564 AGATGG 12 + 2 GAGATG AT1G08710 2771620 2773531 + Genic 932
NC_003070.9 2773235 2773248 AATCAG 13 + 2 TCAGAA AT1G08710 2771620 2773531 + Genic 1615
NC_003070.9 2773266 2773279 AATCAG 13 + 2 TCAGAA AT1G08710 2771620 2773531 + Genic 1646
NC_003070.9 2773323 2773337 AAC 14 - 4 GTT AT1G08710 2771620 2773531 + Genic 1703
NC_003070.9 2773914 2773926 AAGATT 12 - 2 CTTAAT EDR1 2773941 2779308 + Intergenic -15
NC_003070.9 2774051 2774075 AAG 24 + 8 GAA EDR1 2773941 2779308 + Exon 110
NC_003070.9 2778677 2778693 AAAGGG 16 - 2 CTTTCC EDR1 2773941 2779308 + Intron 4736
NC_003070.9 2780701 2780713 AACAGC 12 - 2 TTGCTG XIC 2779438 2788477 + Exon 1263
NC_003070.9 2781160 2781172 AGATAT 12 - 2 ATCTAT XIC 2779438 2788477 + Intron 1722
NC_003070.9 2783259 2783271 AACTGT 12 + 2 GTAACT XIC 2779438 2788477 + Intron 3821
NC_003070.9 2784402 2784414 AATCTG 12 - 2 ATTCAG XIC 2779438 2788477 + Exon 4964